Glyma13g25830 - SoyBase

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Report for Sequence Feature Glyma13g25830

Feature Type:	gene_model
Chromosome:	Gm13
Start:	29055319
stop:	29056178
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma13g25830

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g25830 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.13g189100	Wm82.a2.v1	IGC	As supplied by JGI
Glyma13g25820	Wm82.a1.v1.1	IGC	Correspondences based on a combination of genome sequence coordinate overlap (fjoin) and sequence similarity (ungapped blastn)

References for Glyma13g25830

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g25830

Limit To All Plant Sequences

>Glyma13g25830.1   sequence type=CDS   gene model=Glyma13g25830   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTCACATAATGATGCTCACTGATCTTTACCAATTCCCCTCACTCCTTCATATGCCATTTGCAACAGCAATAAATACTGGCTCACATAAGCCGAAGCAACAGATAGAAGGTAAGAATTGGAATTTGGAGAACAATTTGCAATATTTGCATCTTTCCTCTTAA

Predicted protein sequences of Glyma13g25830

Limit To All Plant Sequences

>Glyma13g25830.1   sequence type=predicted peptide   gene model=Glyma13g25830   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGHIMMLTDLYQFPSLLHMPFATAINTGSHKPKQQIEGKNWNLENNLQYLHLSS*

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