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Report for Sequence Feature Glyma13g22595

Feature Type:gene_model
Chromosome:Gm13
Start:26081463
stop:26087448
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g22595
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G13680AT Annotation by Michelle Graham. TAIR10: callose synthase 5 | chr2:5695124-5706134 FORWARD LENGTH=1923 SoyBaseE_val: 2.00E-27ISS
GO:0006075GO-bp Annotation by Michelle Graham. GO Biological Process: (1->3)-beta-D-glucan biosynthetic process SoyBaseN/AISS
GO:0009556GO-bp Annotation by Michelle Graham. GO Biological Process: microsporogenesis SoyBaseN/AISS
GO:0009827GO-bp Annotation by Michelle Graham. GO Biological Process: plant-type cell wall modification SoyBaseN/AISS
GO:0009846GO-bp Annotation by Michelle Graham. GO Biological Process: pollen germination SoyBaseN/AISS
GO:0009860GO-bp Annotation by Michelle Graham. GO Biological Process: pollen tube growth SoyBaseN/AISS
GO:0010208GO-bp Annotation by Michelle Graham. GO Biological Process: pollen wall assembly SoyBaseN/AISS
GO:0010584GO-bp Annotation by Michelle Graham. GO Biological Process: pollen exine formation SoyBaseN/AISS
GO:0080092GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of pollen tube growth SoyBaseN/AISS
GO:0000148GO-cc Annotation by Michelle Graham. GO Cellular Compartment: 1,3-beta-D-glucan synthase complex SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0003843GO-mf Annotation by Michelle Graham. GO Molecular Function: 1,3-beta-D-glucan synthase activity SoyBaseN/AISS
UniRef100_G7LE18UniRef Annotation by Michelle Graham. Most informative UniRef hit: Callose synthase n=1 Tax=Medicago truncatula RepID=G7LE18_MEDTR SoyBaseE_val: 7.00E-37ISS
UniRef100_I1K4Z0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K4Z0_SOYBN SoyBaseE_val: 3.00E-41ISS

Expression Patterns of Glyma13g22595
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g22595 not represented in the dataset
Glyma13g22595 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g22595 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g157600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g22595
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g22595
>Glyma13g22595.1   sequence type=CDS   gene model=Glyma13g22595   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGCTTAGAAATATTCTTAAAGTCTTTGTCAGTCTTTTTTAGGGTTATCATTCTTCCACTCTTCTACGTTCATTCCTTCAAGGGTGCACCTCAGGGTCTGAAGCAGTTGCTTTTCTTTTTCAAACAAATAAGAGGCATTCCAGCATTTTACATGCTGGCAGTTGCATTATATTTGCTTCCGAATTTACTAGCAGCTGTTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAAACTGGCACATAGTCAGATTCTTCTTCTTATGGTTGTCTCAGATCCGCATGGATACTCCCAATGGAATCAAGGACTCAATTCCTGCTTGGATTAAGTTTTATGTACAGGCTCCTGGTGAAAATTACATACAGCTGAATATACTATGA
Predicted protein sequences of Glyma13g22595
>Glyma13g22595.1   sequence type=predicted peptide   gene model=Glyma13g22595   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCLEIFLKSLSVFFRVIILPLFYVHSFKGAPQGLKQLLFFFKQIRGIPAFYMLAVALYLLPNLLAAVLFLFPMLRRWIENSNWHIVRFFFLWLSQIRMDTPNGIKDSIPAWIKFYVQAPGENYIQLNIL*






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