Glyma13g20212 - SoyBase

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Report for Sequence Feature Glyma13g20212

Feature Type:	gene_model
Chromosome:	Gm13
Start:	23636581
stop:	23636919
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma13g20212

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g20212 not represented in the dataset	Glyma13g20212 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma13g20212

Paralog	Evidence	Comments
Glyma10g05860	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma13g20212 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.13g138800	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma13g20212

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g20212

Limit To All Plant Sequences

>Glyma13g20212.1   sequence type=CDS   gene model=Glyma13g20212   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTATCGATAGCATAGCCAGAATGCAGGACTTTCTCCCTTTTGCATTAGCTAGTTTGAGAGCTGGAAAAAATCTTCTTAGTTTGAACTTATTCTTCCTAATTTTAAATTGCCGTCCCTTGTTGGGGACAATGGACCTTCTTAAGACAGGCTTCGTTCACTTTTTATACAATTATACACAACTCTCCTGTCTCTGGTTTGTGAAGAGAGTTTATTGCAATTGGATATTGGGATGTGCTTTGATTGTTGATATTCCGGTAAAAGGCAATTTTTTTTATATGGAAAGTCATTGCATTAACTTTGAACTTTTTCTTTTAAATATTCTTATTCCTATTTAA

Predicted protein sequences of Glyma13g20212

Limit To All Plant Sequences

>Glyma13g20212.1   sequence type=predicted peptide   gene model=Glyma13g20212   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSIDSIARMQDFLPFALASLRAGKNLLSLNLFFLILNCRPLLGTMDLLKTGFVHFLYNYTQLSCLWFVKRVYCNWILGCALIVDIPVKGNFFYMESHCINFELFLLNILIPI*

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