Glyma13g17080 - SoyBase

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Report for Sequence Feature Glyma13g17080

Feature Type:	gene_model
Chromosome:	Gm13
Start:	20902675
stop:	20903284
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma13g17080

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g17080 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma13g17080

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g17080

Limit To All Plant Sequences

>Glyma13g17080.1   sequence type=CDS   gene model=Glyma13g17080   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATCCGAGATCCGCTCCTCGCCGGCAACGCCCCCACCACGCTCACAACCTCGATCTACTTTGTACAGGATTTGTTTTTTACCCAACCCCCCTTAGCCTTCGAAGGCTGCACTCAACACCACGCAGGACAGCAACCCCTCCCTAACCACTGCGACCACCGCAGAAAGAGACCGCCACACCACCCCACCAACCTTTCTCCCTCTTCAACATCCACCATAACCACCACACTCCCGACCAAATCGCCACCTTCTACACAAATACCACCACCAATCCCACCGTCGTTCCACCACCAGCCGCCACCTACTCCGACCACAACCAAACCATGGTCACGGTTCAAATCTGCCAGAGGGGCTTGGAGATCGGAGAGCTCAACCCCCTTTTATGGTGGCTGTGGTGGTGCTACGGAAATGGTCGCGGTGACCGCCAACTATGAAGGAGAGAAGGGGTTGTGA

Predicted protein sequences of Glyma13g17080

Limit To All Plant Sequences

>Glyma13g17080.1   sequence type=predicted peptide   gene model=Glyma13g17080   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
IRDPLLAGNAPTTLTTSIYFVQDLFFTQPPLAFEGCTQHHAGQQPLPNHCDHRRKRPPHHPTNLSPSSTSTITTTLPTKSPPSTQIPPPIPPSFHHQPPPTPTTTKPWSRFKSARGAWRSESSTPFYGGCGGATEMVAVTANYEGEKGL*

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