Glyma13g14336 - SoyBase

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Report for Sequence Feature Glyma13g14336

Feature Type:	gene_model
Chromosome:	Gm13
Start:	18057763
stop:	18059890
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma13g14336

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF08646	PFAM	Replication factor-A C terminal domain	JGI		ISS
UniRef100_G7J1G0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Replication factor-a protein 1 (Rpa1) family protein n=1 Tax=Medicago truncatula RepID=G7J1G0_MEDTR	SoyBase	E_val: 1.00E-17	ISS
UniRef100_UPI0002337D99	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002337D99 related cluster n=1 Tax=unknown RepID=UPI0002337D99	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma13g14336

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g14336 not represented in the dataset	Glyma13g14336 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g14336 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.13g029300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma13g14336

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g14336

Limit To All Plant Sequences

>Glyma13g14336.1   sequence type=CDS   gene model=Glyma13g14336   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGACTTGAAAGAAAATTGTACTTATGTCATGCACAATTTTAAAGTGATAAAAAACAATGGTCAGTATAGAGTGTGTGATCATCAATTTAAATTGGTGTTTATTGGGGTTACTGTTGTGAGGGAGTGTGTTCTAGGGGACATCCCTTTTAGAAAATACAGGTTTGCTGGATTTGCAGATGTTGTGGCTGGCCAGTTTGAACGTGGACTATTTGTTGATGTTATTGGTGTTGTGGAGGAGGTTGTCTTTCGGCAAGTTTCAGGAAAAGGTAGAAGGGTAGTCTTCAAATTAAAGGACTTGAGGCTTGCAGAGTTGGGCATTGAGGCCCGGTCAGGTTTTAAATCCCATGGTGAAGGGAGTACACAACTTTTAGGTTCTATCCAATTATCATCAAAAGAATCATTCTTTGGCAAGGCTGAGGCAAAGACTATTGTTGACATTAACACCATCTCTGAAAAATTGTTTGTCACTGTTGGCACAATTACTAGGATTGTTCTGGACAATCATTCATGGTGTTATACAACTTGCATTCAGTGCCATAAAAAAAGGGATGCAGAGATGGCGCCCTTTAGATGTGCATGCAGCAAATACAATAAGGAAGTTGTGCTTAGGTATAGGCTTGAGGTGATGATCAACCAAGGAAATGAAAGCACAAAATTCCTGCTTTGGGACCGTGAATGCAGTGAGTTAATTGGCCAATCAGCTGATGCAGTTAATAAGCTTAAAATTGAAGATGGTGATGTTGATTTGAATGCTTCACCCCAAGCACTTGATAAGCTGTTGGGTCATGAACTTGCTTTCAAGATAAAGGTGCAACCCAAGTTCAGGAATTCTGCTGTTTTGAAGTGTTCAGCTGACTCGAGCATGATAAATGCTGTGATGGATATGCTAGCTGATGCTGAGACATCTTCAAAAATGGATATCCCGGTTTCTGATTTCAATCATTCTGCTCAACATGAATCTCAATCCCTCTCTGTGACAGCAGATCATGATTCCATGCTTGGACTTGCCTTGACGCCTACAAAGCGGCAGACATTTCAGGATTGTGATGATGAAGCAGGGACCTCTCAAATTTAA

Predicted protein sequences of Glyma13g14336

Limit To All Plant Sequences

>Glyma13g14336.1   sequence type=predicted peptide   gene model=Glyma13g14336   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDLKENCTYVMHNFKVIKNNGQYRVCDHQFKLVFIGVTVVRECVLGDIPFRKYRFAGFADVVAGQFERGLFVDVIGVVEEVVFRQVSGKGRRVVFKLKDLRLAELGIEARSGFKSHGEGSTQLLGSIQLSSKESFFGKAEAKTIVDINTISEKLFVTVGTITRIVLDNHSWCYTTCIQCHKKRDAEMAPFRCACSKYNKEVVLRYRLEVMINQGNESTKFLLWDRECSELIGQSADAVNKLKIEDGDVDLNASPQALDKLLGHELAFKIKVQPKFRNSAVLKCSADSSMINAVMDMLADAETSSKMDIPVSDFNHSAQHESQSLSVTADHDSMLGLALTPTKRQTFQDCDDEAGTSQI*

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