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Report for Sequence Feature Glyma13g13791

Feature Type:gene_model
Chromosome:Gm13
Start:17523817
stop:17524552
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g13791
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G05030AT Annotation by Michelle Graham. TAIR10: Major facilitator superfamily protein | chr1:1438324-1441385 REVERSE LENGTH=524 SoyBaseE_val: 1.00E-27ISS
GO:0006810GO-bp Annotation by Michelle Graham. GO Biological Process: transport SoyBaseN/AISS
GO:0055085GO-bp Annotation by Michelle Graham. GO Biological Process: transmembrane transport SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0005215GO-mf Annotation by Michelle Graham. GO Molecular Function: transporter activity SoyBaseN/AISS
GO:0005351GO-mf Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity SoyBaseN/AISS
GO:0015144GO-mf Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity SoyBaseN/AISS
GO:0022857GO-mf Annotation by Michelle Graham. GO Molecular Function: transmembrane transporter activity SoyBaseN/AISS
PTHR24063Panther FAMILY NOT NAMED JGI ISS
PTHR24063:SF84Panther SUBFAMILY NOT NAMED JGI ISS
PF00083PFAM Sugar (and other) transporter JGI ISS
UniRef100_I1LXW9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1LXW9_SOYBN SoyBaseE_val: 6.00E-40ISS
UniRef100_Q67V03UniRef Annotation by Michelle Graham. Most informative UniRef hit: Hexose transporter-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q67V03_ORYSJ SoyBaseE_val: 1.00E-27ISS

Expression Patterns of Glyma13g13791
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g13791 not represented in the dataset
Glyma13g13791 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g13791 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g026800 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g13791
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g13791
>Glyma13g13791.1   sequence type=CDS   gene model=Glyma13g13791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGTTCAGTTTTTCTACTCATTGGGTTTGTAATTTTGTGGTGGGATTATTCTTTCTTGAATTGGTGGATAAATTTGGAGTTGCACCTGTATATGCCAGCTTTGGTGCAATTTCCCTGTTAGCCGCAACATTTGCCTATTACTTCATAGTAGAAACTAAGGGACGCTCTCTAGAAGAAATTGAACGATCCTTGAACCTAAAAGCTTAA
Predicted protein sequences of Glyma13g13791
>Glyma13g13791.1   sequence type=predicted peptide   gene model=Glyma13g13791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGFSFSTHWVCNFVVGLFFLELVDKFGVAPVYASFGAISLLAATFAYYFIVETKGRSLEEIERSLNLKA*






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