|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G01170 | AT | Annotation by Michelle Graham. TAIR10: bidirectional amino acid transporter 1 | chr2:102364-104157 REVERSE LENGTH=437 | SoyBase | E_val: 1.00E-59 | ISS |
GO:0003333 | GO-bp | Annotation by Michelle Graham. GO Biological Process: amino acid transmembrane transport | SoyBase | N/A | ISS |
GO:0015812 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gamma-aminobutyric acid transport | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0005313 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: L-glutamate transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015171 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: amino acid transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015180 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: L-alanine transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015181 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: arginine transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015185 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: gamma-aminobutyric acid transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0015189 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: L-lysine transmembrane transporter activity | SoyBase | N/A | ISS |
PTHR11785 | Panther | AMINO ACID TRANSPORTER | JGI | ISS | |
PTHR11785:SF13 | Panther | AMINO ACID TRANSPORTER-RELATED | JGI | ISS | |
UniRef100_B9HJ66 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9HJ66_POPTR | SoyBase | E_val: 1.00E-65 | ISS |
UniRef100_UPI000233C46B | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233C46B related cluster n=1 Tax=unknown RepID=UPI000233C46B | SoyBase | E_val: 2.00E-104 | ISS |
Glyma13g12601 not represented in the dataset |
Glyma13g12601 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.13g025300 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g12601.1 sequence type=CDS gene model=Glyma13g12601 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTCCTACACGGTAGAATAAATAGTGTTCCTATCTCAGTGATATCATTCTTAAGACAGTTGGGTGTAATCTGGAATGTTTTAGGCGTTTTTGTTCTTATGATACTCATTCCATCTGTTGCAACGAAAAGGGCTAGTCTAAAGTTTGCTTTCACTCATTTCAATACTAAAAATGAGGATGGAATCAAAAGCAAACCCAACATATTTCTCTTGGGACTACTAATGAGTCAATATACCTTAATTGGGTATGATGCATCAGCTCATATGACAGAGGAAACAAAGGGTGCTGATAGAAATAGACCAAAAGGAATAGCCAGCGAAGTTGGGATATTTATTATAGTTGGATGGGGTTACATACTAGGCATTAGCTTTGCCGTTACTAACATCCCTTACTTTTTGAGGGAAAGTAATGATGCAGGTAGGTATGCCATTGGTGAAATGTTTTATCTGGCTTTCTAG
>Glyma13g12601.1 sequence type=predicted peptide gene model=Glyma13g12601 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFLHGRINSVPISVISFLRQLGVIWNVLGVFVLMILIPSVATKRASLKFAFTHFNTKNEDGIKSKPNIFLLGLLMSQYTLIGYDASAHMTEETKGADRNRPKGIASEVGIFIIVGWGYILGISFAVTNIPYFLRESNDAGRYAIGEMFYLAF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||