Glyma13g12074 - SoyBase

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Report for Sequence Feature Glyma13g12074

Feature Type:	gene_model
Chromosome:	Gm13
Start:	15474720
stop:	15485198
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma13g12074

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_C6JSJ8	UniRef	Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein Sb1138s002030 n=2 Tax=Poaceae RepID=C6JSJ8_SORBI	SoyBase	E_val: 9.00E-39	ISS
UniRef100_G7K0D4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: RRNA intron-encoded homing endonuclease n=1 Tax=Medicago truncatula RepID=G7K0D4_MEDTR	SoyBase	E_val: 3.00E-29	ISS

Expression Patterns of Glyma13g12074

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g12074 not represented in the dataset	Glyma13g12074 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g12074 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma13g12074

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g12074

Limit To All Plant Sequences

>Glyma13g12074.1   sequence type=CDS   gene model=Glyma13g12074   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGTCGCGTGCCGGTCGGGGGACGGATTGGGAACGGGCCCTTCGGGGCCTCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTGA

Predicted protein sequences of Glyma13g12074

Limit To All Plant Sequences

>Glyma13g12074.1   sequence type=predicted peptide   gene model=Glyma13g12074   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCFRGESGSSRAGRGTDWERALRGLFPGRRTVNSELVRTRESDCLIKTKHCDGPCGC*

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