Glyma13g12039 - SoyBase

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Report for Sequence Feature Glyma13g12039

Feature Type:	gene_model
Chromosome:	Gm13
Start:	15410215
stop:	15411404
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma13g12039

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_G7K0E9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Cytochrome P450 likeTBP n=1 Tax=Medicago truncatula RepID=G7K0E9_MEDTR	SoyBase	E_val: 6.00E-31	ISS
UniRef100_G7K0E9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 likeTBP n=1 Tax=Medicago truncatula RepID=G7K0E9_MEDTR	SoyBase	E_val: 6.00E-31	ISS

Expression Patterns of Glyma13g12039

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g12039 not represented in the dataset	Glyma13g12039 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g12039 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma13g12039

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g12039

Limit To All Plant Sequences

>Glyma13g12039.1   sequence type=CDS   gene model=Glyma13g12039   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCAGAATCCTGTGGTGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAGTAACAGCACCGGAGGCACGACCCGGCCAGTTAAGGACAGGAGCGCATCGCCGGCAGAAGGGACGAGCCGACCGGTGCACACCGGAGGCGGACCGATCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAA

Predicted protein sequences of Glyma13g12039

Limit To All Plant Sequences

>Glyma13g12039.1   sequence type=predicted peptide   gene model=Glyma13g12039   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPPTVPVNHYSDPEGQHNRIRILWCYPMLMYTERRLALSTLISSSNSTGGTTRPVKDRSASPAEGTSRPVHTGGGPIDPTQGPTTSFLTATT*

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