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Report for Sequence Feature Glyma13g11850

Feature Type:gene_model
Chromosome:Gm13
Start:14813656
stop:14814782
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g11850
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
UniRef100_G7K0D4UniRef Annotation by Michelle Graham. Most informative UniRef hit: RRNA intron-encoded homing endonuclease n=1 Tax=Medicago truncatula RepID=G7K0D4_MEDTR SoyBaseE_val: 1.00E-58ISS
UniRef100_I1LXS8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LXS8_SOYBN SoyBaseE_val: 5.00E-70ISS

Expression Patterns of Glyma13g11850
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g11850 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma13g11850
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g11850
>Glyma13g11850.1   sequence type=CDS   gene model=Glyma13g11850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGTCCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGA
Predicted protein sequences of Glyma13g11850
>Glyma13g11850.1   sequence type=predicted peptide   gene model=Glyma13g11850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLNLVWNKRVKARLILISSTNTNRESVAYRSFSPSEFEARGVRKVTTGITGLWQPSVHSDVAF*






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