Glyma13g11820 - SoyBase

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Report for Sequence Feature Glyma13g11820

Feature Type:	gene_model
Chromosome:	Gm13
Start:	14839793
stop:	14840463
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma13g11820

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_G7K0C9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 likeTBP n=1 Tax=Medicago truncatula RepID=G7K0C9_MEDTR	SoyBase	E_val: 1.00E-54	ISS
UniRef100_I1LXS3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LXS3_SOYBN	SoyBase	E_val: 2.00E-129	ISS

Expression Patterns of Glyma13g11820

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g11820 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma13g11820

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma13g11820

Limit To All Plant Sequences

>Glyma13g11820.2   sequence type=CDS   gene model=Glyma13g11820   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCACAGGCCGACGCCAGGAGCGCGCAGGTGCCGAGGCACGCCAAGGGCGCGCGCTGCCATCCACAATCGCGATGATGACGTCTCCACGAGCATATCAACAGCCCGGGCTTGGGCCACCATCGCAATCCGCGTCGGTCAATGTCCCGAGTCGATCGGCGGACCGGCTCTCACCTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCAGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCACTGAGGACGCTTCTCCAGACTACAATTCGGACGCCGAGGGCGACCGATTTTCATGGTGGGCTTTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAG

Predicted protein sequences of Glyma13g11820

Limit To All Plant Sequences

>Glyma13g11820.2   sequence type=predicted peptide   gene model=Glyma13g11820   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSDSLVRVSRRAEWGAHRPTPGARRCRGTPRARAAIHNRDDDVSTSISTARAWATIAIRVGQCPESIGGPALTSFSSFPRGTCSLSVSRQYLALDGIYRPIGAAFPNNPTRRQRLVVRQGPGTTGLSPSLAPPSRGLGPGPPLRTLLQTTIRTPRATDFHGGLFPVRSPLLRESLLVSFPPLIDMLKLSG*

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