Glyma13g11791 - SoyBase

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Report for Sequence Feature Glyma13g11791

Feature Type:	gene_model
Chromosome:	Gm13
Start:	14778470
stop:	14782496
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma13g11791

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g11791 not represented in the dataset	Glyma13g11791 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g11791 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.13g011100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma13g11791

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma13g11791

Limit To All Plant Sequences

>Glyma13g11791.2   sequence type=transcript   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCAGGCTCCGGCTCCAAATTATGAGGGAGCGGGTGGTGTCCCAAATTTCTATTTTCCCTCTCGTCTTTTCCCTCCCATTCGTCTTTTCCCTCTCGTCTTTTCCCTCCCATTCGTCTTTTCCCTCCCATTCTCTTCTCCATGGGCTAGGGTTTATACCAACGAAACTTTCGACCTCACAACTATTATTGCCTTTCCGGTTCAAATCAAAGTGAGAGATTATAAAATTTTATTGTTTTTTTTTTGTAAAGTGAATCATCCGTTGATGGTGCAGTGCCGTGGAAATTTTCCCCCTTAACCCTTCTTTAATAATATTCATATTCATTCTGCCTTTCTTTTTCAAATTAATAATCGTTTCATTCACCTATTATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGGTCATACATGTTAATCGGACATCTGTGTTGAAAGTTATGCAGATAGCTAGTTCAACAAGTAAAACACACATGGACCTTCAACGGGCTTCGGCGAACCATCACTCCCCTTGCCGACCCAGCTTGTGACATTGGAATTAAGATTTGGGGATTTAAAATGGATCACCGAATGGCTGCTGAGCTAGAACGAAGTTATAGAGCTACTTTGCAGGCCAACATTAGGGGATTTTACATTCCTCCCTGACTCGAGAATCTATATTCATTTCTCATGCTTCTATAGTTAATTGTGGGTACAAATTTCTCATACTTTGCAGGCCAACATTAGGGGATTTTACATTCCTCCCTGACTCGAGAATCTGTATTCATTTCTCATTTCTCATTTCTCATAAAAATATGTCAAGTGGAATTTTCTGTGCCTTGTTATGTTGTGGGTACAAATTTTGTCCTTCTACAGTTAATTGTGTCATACATTCTTTTATTCATGCTTCCCCTAGGTGGTCTCGTAATTTTTCCAGATGTGTACAATATTTGACGAACATAATGGCAAAATAGGACGAAGCTGGCAGCAGAATTATCTGCATATGGCTTGCGGCCTGCGGGTTGAGTTTTTTTAAATCACCTAAAGCTTAAGCCTCAGGTTGGTGATGATTCCCTTGTTTATTTGTACCTTTAAGACGTGTAAAACTCGTCTTCTTCAAGCT

>Glyma13g11791.3   sequence type=transcript   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCAGGCTCCGGCTCCAAATTATGAGGGAGCGGGTGGTGTCCCAAATTTCTATTTTCCCTCTCGTCTTTTCCCTCCCATTCGTCTTTTCCCTCTCGTCTTTTCCCTCCCATTCGTCTTTTCCCTCCCATTCTCTTCTCCATGGGCTAGGGTTTATACCAACGAAACTTTCGACCTCACAACTATTATTGCCTTTCCGGTTCAAATCAAAGTGAGAGATTATAAAATTTTATTGTTTTTTTTTTGTAAAGTGAATCATCCGTTGATGGTGCAGTGCCGTGGAAATTTTCCCCCTTAACCCTTCTTTAATAATATTCATATTCATTCTGCCTTTCTTTTTCAAATTAATAATCGTTTCATTCACCTATTATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGATAGCTAGTTCAACAAGTAAAACACACATGGACCTTCAACGGGCTTCGGCGAACCATCACTCCCCTTGCCGACCCAGCTTGTGACATTGGAATTAAGATTTGGGGATTTAAAATGGATCACCGAATGGCTGCTGAGCTAGAACGAAGTTATAGAGCTACTTTGCAGGCCAACATTAGGGGATTTTACATTCCTCCCTGACTCGAGAATCTATATTCATTTCTCATGCTTCTATAGTTAATTGTGGGTACAAATTTCTCATACTTTGCAGGCCAACATTAGGGGATTTTACATTCCTCCCTGACTCGAGAATCTGTATTCATTTCTCATTTCTCATTTCTCATAAAAATATGTCAAGTGGAATTTTCTGTGCCTTGTTATGTTGTGGGTACAAATTTTGTCCTTCTACAGTTAATTGTGTCATACATTCTTTTATTCATGCTTCCCCTAGGTGGTCTCGTAATTTTTCCAGATGTGTACAATATTTGACGAACATAATGGCAAAATAGGACGAAGCTGGCAGCAGAATTATCTGCATATGGCTTGCGGCCTGCGGGTTGAGTTTTTTTAAATCACCTAAAGCTTAAGCCTCAGGTAAAGTGAGAAGAATTGGTATAAACCTGGTGTAAGGAAGTACAGGTAAGGACTACAGTAAACTATATACCTAATATTACAAACTTACATCGGTATGACTGAAAAGAGTCGTAAGTAAATGAACCTGAGACTTAAAATGCATAGAATACAAACCTGACATGTAAATTATTGTTTTAATATGGTATGGTATGGTATGGTACTGTATGGTATGGTATGGTATGGTATGTTATACATCAAATGGTAGCTAATAAACTATATGCGTCTTCTAGTGTAGGAGATCAAGGAATTGGATTGATTGGTACAAACCAAGATGAATGCCGTCTTTAAATGTTATCCTACTTTGATGCGGTGTTGATGTTCATAAAACCCAATTGTGTGCACCAATAATTCTTGACACGTTATGCATCTACTTTAACATGATTCCGTTTTCAATATAATTGACAAATAATTGTTGATATACTTGAGACTCTGGATGGATGCATGCTATAGTTATTTACTTGCAAACTGTTTGGGAACTTTCATATAACGGCAATTGGTGTTACCTTAATCGCATTATCAAATAACCAAATACCAAATTATTCCAGGTAATTAGGGAGATGTTAGTTTTTGAGCACGAGCACCCAGCGTGGATACTAAGCTTTAAGAGACATTTTGGAAACCCTGGCCATTCTTTACAAAATCCAATCAATTCATTGATATTTGAGAAAGCCCTTTTGAAAATAGGCCAAGGCAAGGACTACGTGTCCTCAGTCTCTGTTTTGATAACTCTAGTATAGTCACCTCAGCAGTTATGTCTATGCTATTTTTGGTAGGTGTATGTGATTGGGTAAAATTTATTATAGTGTTAGGTTCGACCTAATTACTTTATTTGGATGAATGTATTTTAACTACAATTTATTTCATTCTAC

>Glyma13g11791.4   sequence type=transcript   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCAGGCTCCGGCTCCAAATTATGAGGGAGCGGGTGGTGTCCCAAATTTCTATTTTCCCTCTCGTCTTTTCCCTCCCATTCGTCTTTTCCCTCTCGTCTTTTCCCTCCCATTCGTCTTTTCCCTCCCATTCTCTTCTCCATGGGCTAGGGTTTATACCAACGAAACTTTCGACCTCACAACTATTATTGCCTTTCCGGTTCAAATCAAAGTGAGAGATTATAAAATTTTATTGTTTTTTTTTTGTAAAGTGAATCATCCGTTGATGGTGCAGTGCCGTGGAAATTTTCCCCCTTAACCCTTCTTTAATAATATTCATATTCATTCTGCCTTTCTTTTTCAAATTAATAATCGTTTCATTCACCTATTATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGATAGCTAGTTCAACAAGTAAAACACACATGGACCTTCAACGGGCTTCGGCGAACCATCACTCCCCTTGCCGACCCAGCTTGTGACATTGGAATTAAGATTTGGGGATTTAAAATGGATCACCGAATGGCTGCTGAGCTAGAACGAAGTTATAGAGCTACTTTGCAGGCCAACATTAGGGGATTTTACATTCCTCCCTGACTCGAGAATCTATATTCATTTCTCATGCTTCTATAGTTAATTGTGGGTACAAATTTCTCATACTTTGCAGGCCAACATTAGGGGATTTTACATTCCTCCCTGACTCGAGAATCTGTATTCATTTCTCATTTCTCATTTCTCATAAAAATATGTCAAGTGGAATTTTCTGTGCCTTGTTATGTTGTGGGTACAAATTTTGTCCTTCTACAGTTAATTGTGTCATACATTCTTTTATTCATGCTTCCCCTAGGTGGTCTCGTAATTTTTCCAGATGTGTACAATATTTGACGAACATAATGGCAAAATAGGACGAAGCTGGCAGCAGAATTATCTGCATATGGCTTGCGGCCTGCGGGTTGAGTTTTTTTAAATCACCTAAAGCTTAAGCCTCAGGTTGGTGATGATTCCCTTGTTTATTTGTACCTTTAAGACGTGTAAAACTCGTCTTCTTCAAGCT

Coding sequences of Glyma13g11791

Limit To All Plant Sequences

>Glyma13g11791.1   sequence type=CDS   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGGTCATACATGTTAATCGGACATCTGTGTTGA

>Glyma13g11791.2   sequence type=CDS   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGGTCATACATGTTAATCGGACATCTGTGTTGA

>Glyma13g11791.3   sequence type=CDS   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGATAG

>Glyma13g11791.4   sequence type=CDS   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTACTGCTTGCTTCCTTTGTTATTCTGTTGCTATTAGCATATTTCTTCACCTATTTTTTATTTGGTGGTTTACAAGTTGTTTTCTCTCTGGAAGACTGCCACTTAATTGAACTACCTTGTTCAATGTCATTATTCGTGTGTGCATATCATACCTTTCTTTCAGACATATCTTTCATAGGCTCATTGAGAGACCTTCACCATGATTCAATACGTTTATGGCGTGGGTCCTTATGTCTTGGAGCCAAGATTCTGCACTTTCTCCTCCTTCCTCCTAACTACCACAACTACCACGTAAGGTGGTATCTTGTTCATACTTGTCATTTCATAAGAACCAAAAGATAG

Predicted protein sequences of Glyma13g11791

Limit To All Plant Sequences

>Glyma13g11791.1   sequence type=predicted peptide   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLLLASFVILLLLAYFFTYFLFGGLQVVFSLEDCHLIELPCSMSLFVCAYHTFLSDISFIGSLRDLHHDSIRLWRGSLCLGAKILHFLLLPPNYHNYHVRWYLVHTCHFIRTKRSYMLIGHLC*

>Glyma13g11791.2   sequence type=predicted peptide   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLLLASFVILLLLAYFFTYFLFGGLQVVFSLEDCHLIELPCSMSLFVCAYHTFLSDISFIGSLRDLHHDSIRLWRGSLCLGAKILHFLLLPPNYHNYHVRWYLVHTCHFIRTKRSYMLIGHLC*

>Glyma13g11791.3   sequence type=predicted peptide   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLLLASFVILLLLAYFFTYFLFGGLQVVFSLEDCHLIELPCSMSLFVCAYHTFLSDISFIGSLRDLHHDSIRLWRGSLCLGAKILHFLLLPPNYHNYHVRWYLVHTCHFIRTKR*

>Glyma13g11791.4   sequence type=predicted peptide   gene model=Glyma13g11791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLLLASFVILLLLAYFFTYFLFGGLQVVFSLEDCHLIELPCSMSLFVCAYHTFLSDISFIGSLRDLHHDSIRLWRGSLCLGAKILHFLLLPPNYHNYHVRWYLVHTCHFIRTKR*

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