|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G22460 | AT | Annotation by Michelle Graham. TAIR10: alpha/beta-Hydrolases superfamily protein | chr5:7443659-7445269 REVERSE LENGTH=340 | SoyBase | E_val: 2.00E-42 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005618 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cell wall | SoyBase | N/A | ISS |
GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
GO:0009505 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plant-type cell wall | SoyBase | N/A | ISS |
GO:0009506 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
PTHR10992 | Panther | ALPHA/BETA HYDROLASE RELATED | JGI | ISS | |
PTHR10992:SF198 | Panther | ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN | JGI | ISS | |
UniRef100_B9SCS4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SCS4_RICCO | SoyBase | E_val: 7.00E-54 | ISS |
UniRef100_I3SZW9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Medicago truncatula RepID=I3SZW9_MEDTR | SoyBase | E_val: 2.00E-58 | ISS |
Glyma13g11561 not represented in the dataset |
Glyma13g11561 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.13g009000 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g11561.1 sequence type=CDS gene model=Glyma13g11561 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTTTCAAGAGCAGCAATAGTGTTACTCATAGGTCTTGTGGGAATGTTTTACCAGGGCACTCAACTCCCCCCTTCAAACAACAGTGATTCATCAGATGATGGTGTTCCAGTTTCACCACCAAGAGTCAGACTCAGAGATGGGAGGTACTTGGCTTATAGAGAAAAGGGTGTCCCCAAGGACCAAGCAAAACACAGCATCATCATTGTACATGGCTTTGGAAGCTCCAAAGATATGAATTTTCTGGCACCCCAGGAACTAATAGATGAATTGGGTATATATATTCTGCAATATGATCGAGCTGGGTATGGAGAGAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTTGCTGATCTGTTACAGATA
>Glyma13g11561.1 sequence type=predicted peptide gene model=Glyma13g11561 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVSRAAIVLLIGLVGMFYQGTQLPPSNNSDSSDDGVPVSPPRVRLRDGRYLAYREKGVPKDQAKHSIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELADLLQI
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||