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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G02960 | AT | Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1); Has 100 Blast hits to 99 proteins in 48 species: Archae - 0; Bacteria - 4; Metazoa - 26; Fungi - 13; Plants - 29; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). | chr1:667002-669773 REVERSE LENGTH=471 | SoyBase | E_val: 5.00E-34 | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
UniRef100_G7J847 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=G7J847_MEDTR | SoyBase | E_val: 4.00E-150 | ISS |
UniRef100_Q9SRY8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: F22D16.4 protein n=1 Tax=Arabidopsis thaliana RepID=Q9SRY8_ARATH | SoyBase | E_val: 9.00E-29 | ISS |
Glyma13g11311 not represented in the dataset |
Glyma13g11311 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.13g007800 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g11311.2 sequence type=transcript gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTGTTATACGGATCAAACACCATCCATCAGCCACCAAGAAGCGAAGGCGAAAAAGCTTACCTCGACAGAAGTGGCGGAGTCCTCAATGTCAACAGAAGCAACCAATGGTGCGGAAAGGGAACGAAGAACAATGAAGAAGACACAAGAACAATGAAGAAGACGAAGCCCAAGGCACACTCAAGAAGACAAACCGAGAAGTCGAAGGCACCGGGAGAAGAAAAGAAAGCGACGTTGCAACCACCTTGTCCGGAGAATGAACAATACTAATGCTGAGTGCAGGGTATTTAAAATTTAAGTGAAATAATATTTTTGCCACTTTACTTAAATTGCTAGGTGCACTTAGCAACACCCAATAACAAAACTTCTCCCTTAAGAAAAAAGATTTAAGAAAATGTGACAGAATGAGAATGATGAACCTCCATCATCCATGTTCATGAGTTGAAACTTGAAACTGTAACGTCTACGTTGAGATGAGGAGGCAAAGGCAACCTTCTCGGCGTGCACCAAAAACGTTATTCCGCGCCCACCAACCAGACTCAGACGAAAGCATTTCTGACGACGACGTTTTCCCCAACAATGCGCCTTCATTACACCCCACCAACAAGCAAGAATTGCCACTTCTGGTGCGGCTGGACATTCTAAAAGGAATCAGTAATCAGAATTTGAATGGGAAAGGCAACACCTCTTCATTTGAGAAACCGCTTGAAGATGAGGTTGAAATGCCTGATTTCAACGAGGGAGAGGTGGTTGCCAATTCGACTGACGAAGAAAACAATTCTGCAGATGGGCTCCAAAAGTATGGTCCAAGATCTATTAGAAATGAACAAGTTAGAAATAGAAATAGAATTTCTGAAGTGCTGTTACATTCCAAAGAAAGTGCTTCTGCATCCCATGCTACCTACTCCAAAGCAAATACATCTGGGATTAAGAAAGCTAAGCCAAGATTTTCATTAGCATCAGTGTTATGTAAAAGTGGGGGCATTGATCATTCAATCTCCAATATTGAGAGCTTTCCTGAAATTATAAAAGCTGTTGATCCTAGAGCTTCTGCAAATTTAGATGGAAATCATCTAGATGATGATGACAGAATTGAAATAAATTCCGACATTGAGCCTGCTGAAACAGAAGCTTTACCACATGAATTTAATATGGCCCCAATAGCTGATCTTTTTGACAATCTCCAAGATAAGGCTCATCAGGAGACAGTCATTGACAGTGAAGATTCCCCCGAGTCTGTGGATAGTGAATCATCAAGTGACAAAGAGGTAAGTGATCAACACATGAAAATTACTTTCCCTGGAAAGAAAATGCAGACCATTGCAGAACGATTTGAAGAAGCTTTGGGGACATCCTCTGTTATCACTGAAGGGACACATGTTGGAGCACCTAATTCATTGAGACCTGGAATATTTGGAAAACTACAGCATATGATGCTGAAAGTAAAAGAAACAGACATGGAGTTCTGGAAAAAGTTACAACCTGAAGCTAGGCCAGATGGTGAACTTGGCTGCATTGATGTAAAAATCATTTCAAGATACCGCGACGGAAAGCTGACTGTTTGTCATTGCTCATTTGGCAAGTACACAGAGAATTTTCTGTTACAAGATAACTCCAAAGGAATGAGGTTTGGTGGCAGCGAATGCAGTCAAAGCACCATTATCTTTAGTCCAAGGGTTTGCAACAATGTTGACCTTGAAGTTGGGAGCTTGATCCGAATTCACCCTCCATGGAAGGAAGTTCAAGCGGGAAATGATAATGTTATCTTGTGCACTTATTTCTCCGAAATTTTATTCCCAGTTTGATTCATTGTTCATAAGTTTATTTTAGTTTCTTACAAACCAAGGAAAATTATGCAAACCACCTTTTGTAAGTGAATAGAATATCAAACAAATATGCTGCTGTTCGGTTTTAGGAACTAGGAAAGGGACAGCTCTTCTTTCTTCTGGCTCATGAGTCAAGGGACCTTTGAGTTATTGTAGTTTTAAAGTTCATGGTAGAGAAAAATTAGAAGAGAATTTAGAGAGAATCAGAAAGAATGTCTAACGTTATTCATATCTGATATCTGATATTGATGCAATTAGAAGGACTTGTTAATAAACAAACTTAGAAGAGAAAAATTAGAAAAATTGAGTTATTGTAGTTTTAAAGTTCATGGTAGAGAAAAATTAGAAGAGAATTTAGAGAGAATCAGAAAGAATGTCTAACGTTATTCATATCTGATATCTGATATTGATGCAATTAGAAGGACTTGTTAATAAACAAACTTGTGGTTCATTTTTTTTAAAGAGCAGAGTATTAGGCCTAAATCCGCAAGTTTACCCATATAAGTTGCAATCTGTGTGAGTTAGGACTAAGGAAAATTTAAGCTCAATTAAGTGCATTTGTTTTTAATATTCACCTATTTAAAT >Glyma13g11311.3 sequence type=transcript gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATCAAACACCATCCATCAGCCACCAAGAAGCGAAGGCGAAAAAGCTTACCTCGACAGAAGTGGCGGAGTCCTCAATGTCAACAGAAGCAACCAATGGTGCGGAAAGGGAACGAAGAACAATGAAGAAGACACAAGAACAATGAAGAAGACGAAGCCCAAGGCACACTCAAGAAGACAAACCGAGAAGTCGAAGGCACCGGGAGAAGAAAAGAAAGCGACGTTGCAACCACCTTGTCCGGAGAATGAACAATACTAATGCTGAGTGCAGGGTATTTAAAATTTAAGTGAAATAATATTTTTGCCACTTTACTTAAATTGCTAGGTGCACTTAGCAACACCCAATAACAAAACTTCTCCCTTAAGAAAAAAGATTTAAGAAAATGTGACAGAATGAGAATGATGAACCTCCATCATCCATGTTCATGAGTTGAAACTTGAAACTGTAACGTCTACGTTGAGATGAGGAGGCAAAGGCAACCTTCTCGGCGTGCACCAAAAACGTTATTCCGCGCCCACCAACCAGACTCAGACGAAAGCATTTCTGACGACGACGTTTTCCCCAACAATGCGCCTTCATTACACCCCACCAACAAGCAAGAATTGCCACTTCTGGTGCGGCTGGACATTCTAAAAGGAATCAGTAATCAGAATTTGAATGGGAAAGGCAACACCTCTTCATTTGAGAAACCGCTTGAAGATGAGGTTGAAATGCCTGATTTCAACGAGGGAGAGGTGGTTGCCAATTCGACTGACGAAGAAAACAATTCTGCAGATGGGCTCCAAAAGTATGGTCCAAGATCTATTAGAAATGAACAAGTTAGAAATAGAAATAGAATTTCTGAAGTGCTGTTACATTCCAAAGAAAGTGCTTCTGCATCCCATGCTACCTACTCCAAAGCAAATACATCTGGGATTAAGAAAGCTAAGCCAAGATTTTCATTAGCATCAGTGTTATGTAAAAGTGGGGGCATTGATCATTCAATCTCCAATATTGAGAGCTTTCCTGAAATTATAAAAGCTGTTGATCCTAGAGCTTCTGCAAATTTAGATGGAAATCATCTAGATGATGATGACAGAATTGAAATAAATTCCGACATTGAGCCTGCTGAAACAGAAGCTTTACCACATGAATTTAATATGGCCCCAATAGCTGATCTTTTTGACAATCTCCAAGATAAGGCTCATCAGGAGACAGTCATTGACAGTGAAGATTCCCCCGAGTCTGTGGATAGTGAATCATCAAGTGACAAAGAGGTAAGTGATCAACACATGAAAATTACTTTCCCTGGAAAGAAAATGCAGACCATTGCAGAACGATTTGAAGAAGCTTTGGGGACATCCTCTGTTATCACTGAAGGGACACATGTTGGAGCACCTAATTCATTGAGACCTGGAATATTTGGAAAACTACAGCATATGATGCTGAAAGTAAAAGAAACAGACATGGAGTTCTGGAAAAAGTTACAACCTGAAGCTAGGCCAGATGGTGAACTTGGCTGCATTGATGTAAAAATCATTTCAAGATACCGCGACGGAAAGCTGACTGTTTGTCATTGCTCATTTGGCAAGTACACAGAGAATTTTCTGTTACAAGATAACTCCAAAGGAATGAGGTTTGGTGGCAGCGAATGCAGTCAAAGCACCATTATCTTTAGTCCAAGGGTTTGCAACAATGTTGACCTTGAAGTTGGGAGCTTGATCCGAATTCACCCTCCATGGCAGTCCACTATCGTGTGGGTCCAAAAATGGATTAACAGAAGTAATAGCCCTAACTCGATCTGCCATATTTAACGTTAGTCCATTGCAAACTGAGCTTATACGGGCCTAGCTAGCAAGTATACGTAGCCCTGTTTTTCAAGTATATTGAGCAAGTTGTGGAGCTTTATTTCTTTCCTTCTATTCTTCTTCTTGCTCTTTATCCTTGGCATCATAAAAGG
>Glyma13g11311.1 sequence type=CDS gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGGAGGCAAAGGCAACCTTCTCGGCGTGCACCAAAAACGTTATTCCGCGCCCACCAACCAGACTCAGACGAAAGCATTTCTGACGACGACGTTTTCCCCAACAATGCGCCTTCATTACACCCCACCAACAAGCAAGAATTGCCACTTCTGGTGCGGCTGGACATTCTAAAAGGAATCAGTAATCAGAATTTGAATGGGAAAGGCAACACCTCTTCATTTGAGAAACCGCTTGAAGATGAGGTTGAAATGCCTGATTTCAACGAGGGAGAGGTGGTTGCCAATTCGACTGACGAAGAAAACAATTCTGCAGATGGGCTCCAAAAGTATGGTCCAAGATCTATTAGAAATGAACAAGTTAGAAATAGAAATAGAATTTCTGAAGTGCTGTTACATTCCAAAGAAAGTGCTTCTGCATCCCATGCTACCTACTCCAAAGCAAATACATCTGGGATTAAGAAAGCTAAGCCAAGATTTTCATTAGCATCAGTGTTATGTAAAAGTGGGGGCATTGATCATTCAATCTCCAATATTGAGAGCTTTCCTGAAATTATAAAAGCTGTTGATCCTAGAGCTTCTGCAAATTTAGATGGAAATCATCTAGATGATGATGACAGAATTGAAATAAATTCCGACATTGAGCCTGCTGAAACAGAAGCTTTACCACATGAATTTAATATGGCCCCAATAGCTGATCTTTTTGACAATCTCCAAGATAAGGCTCATCAGGAGACAGTCATTGACAGTGAAGATTCCCCCGAGTCTGTGGATAGTGAATCATCAAGTGACAAAGAGGTAAGTGATCAACACATGAAAATTACTTTCCCTGGAAAGAAAATGCAGACCATTGCAGAACGATTTGAAGAAGCTTTGGGGACATCCTCTGTTATCACTGAAGGGACACATGTTGGAGCACCTAATTCATTGAGACCTGGAATATTTGGAAAACTACAGCATATGATGCTGAAAGTAAAAGAAACAGACATGGAGTTCTGGAAAAAGTTACAACCTGAAGCTAGGCCAGATGGTGAACTTGGCTGCATTGATGTAAAAATCATTTCAAGATACCGCGACGGAAAGCTGACTGTTTGTCATTGCTCATTTGGCAAGTACACAGAGAATTTTCTGTTACAAGATAACTCCAAAGGAATGAGGTTTGGTGGCAGCGAATGCAGTCAAAGCACCATTATCTTTAGTCCAAGGGTTTGCAACAATGTTGACCTTGAAGTTGGGAGCTTGATCCGAATTCACCCTCCATGGCAGTCCACTATCGTGTGGGTCCAAAAATGGATTAACAGAAGTAATAGCCCTAACTCGATCTGCCATATTTAA >Glyma13g11311.2 sequence type=CDS gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGGAGGCAAAGGCAACCTTCTCGGCGTGCACCAAAAACGTTATTCCGCGCCCACCAACCAGACTCAGACGAAAGCATTTCTGACGACGACGTTTTCCCCAACAATGCGCCTTCATTACACCCCACCAACAAGCAAGAATTGCCACTTCTGGTGCGGCTGGACATTCTAAAAGGAATCAGTAATCAGAATTTGAATGGGAAAGGCAACACCTCTTCATTTGAGAAACCGCTTGAAGATGAGGTTGAAATGCCTGATTTCAACGAGGGAGAGGTGGTTGCCAATTCGACTGACGAAGAAAACAATTCTGCAGATGGGCTCCAAAAGTATGGTCCAAGATCTATTAGAAATGAACAAGTTAGAAATAGAAATAGAATTTCTGAAGTGCTGTTACATTCCAAAGAAAGTGCTTCTGCATCCCATGCTACCTACTCCAAAGCAAATACATCTGGGATTAAGAAAGCTAAGCCAAGATTTTCATTAGCATCAGTGTTATGTAAAAGTGGGGGCATTGATCATTCAATCTCCAATATTGAGAGCTTTCCTGAAATTATAAAAGCTGTTGATCCTAGAGCTTCTGCAAATTTAGATGGAAATCATCTAGATGATGATGACAGAATTGAAATAAATTCCGACATTGAGCCTGCTGAAACAGAAGCTTTACCACATGAATTTAATATGGCCCCAATAGCTGATCTTTTTGACAATCTCCAAGATAAGGCTCATCAGGAGACAGTCATTGACAGTGAAGATTCCCCCGAGTCTGTGGATAGTGAATCATCAAGTGACAAAGAGGTAAGTGATCAACACATGAAAATTACTTTCCCTGGAAAGAAAATGCAGACCATTGCAGAACGATTTGAAGAAGCTTTGGGGACATCCTCTGTTATCACTGAAGGGACACATGTTGGAGCACCTAATTCATTGAGACCTGGAATATTTGGAAAACTACAGCATATGATGCTGAAAGTAAAAGAAACAGACATGGAGTTCTGGAAAAAGTTACAACCTGAAGCTAGGCCAGATGGTGAACTTGGCTGCATTGATGTAAAAATCATTTCAAGATACCGCGACGGAAAGCTGACTGTTTGTCATTGCTCATTTGGCAAGTACACAGAGAATTTTCTGTTACAAGATAACTCCAAAGGAATGAGGTTTGGTGGCAGCGAATGCAGTCAAAGCACCATTATCTTTAGTCCAAGGGTTTGCAACAATGTTGACCTTGAAGTTGGGAGCTTGATCCGAATTCACCCTCCATGGAAGGAAGTTCAAGCGGGAAATGATAATGTTATCTTGTGCACTTATTTCTCCGAAATTTTATTCCCAGTTTGA >Glyma13g11311.3 sequence type=CDS gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGGAGGCAAAGGCAACCTTCTCGGCGTGCACCAAAAACGTTATTCCGCGCCCACCAACCAGACTCAGACGAAAGCATTTCTGACGACGACGTTTTCCCCAACAATGCGCCTTCATTACACCCCACCAACAAGCAAGAATTGCCACTTCTGGTGCGGCTGGACATTCTAAAAGGAATCAGTAATCAGAATTTGAATGGGAAAGGCAACACCTCTTCATTTGAGAAACCGCTTGAAGATGAGGTTGAAATGCCTGATTTCAACGAGGGAGAGGTGGTTGCCAATTCGACTGACGAAGAAAACAATTCTGCAGATGGGCTCCAAAAGTATGGTCCAAGATCTATTAGAAATGAACAAGTTAGAAATAGAAATAGAATTTCTGAAGTGCTGTTACATTCCAAAGAAAGTGCTTCTGCATCCCATGCTACCTACTCCAAAGCAAATACATCTGGGATTAAGAAAGCTAAGCCAAGATTTTCATTAGCATCAGTGTTATGTAAAAGTGGGGGCATTGATCATTCAATCTCCAATATTGAGAGCTTTCCTGAAATTATAAAAGCTGTTGATCCTAGAGCTTCTGCAAATTTAGATGGAAATCATCTAGATGATGATGACAGAATTGAAATAAATTCCGACATTGAGCCTGCTGAAACAGAAGCTTTACCACATGAATTTAATATGGCCCCAATAGCTGATCTTTTTGACAATCTCCAAGATAAGGCTCATCAGGAGACAGTCATTGACAGTGAAGATTCCCCCGAGTCTGTGGATAGTGAATCATCAAGTGACAAAGAGGTAAGTGATCAACACATGAAAATTACTTTCCCTGGAAAGAAAATGCAGACCATTGCAGAACGATTTGAAGAAGCTTTGGGGACATCCTCTGTTATCACTGAAGGGACACATGTTGGAGCACCTAATTCATTGAGACCTGGAATATTTGGAAAACTACAGCATATGATGCTGAAAGTAAAAGAAACAGACATGGAGTTCTGGAAAAAGTTACAACCTGAAGCTAGGCCAGATGGTGAACTTGGCTGCATTGATGTAAAAATCATTTCAAGATACCGCGACGGAAAGCTGACTGTTTGTCATTGCTCATTTGGCAAGTACACAGAGAATTTTCTGTTACAAGATAACTCCAAAGGAATGAGGTTTGGTGGCAGCGAATGCAGTCAAAGCACCATTATCTTTAGTCCAAGGGTTTGCAACAATGTTGACCTTGAAGTTGGGAGCTTGATCCGAATTCACCCTCCATGGCAGTCCACTATCGTGTGGGTCCAAAAATGGATTAACAGAAGTAATAGCCCTAACTCGATCTGCCATATTTAA
>Glyma13g11311.1 sequence type=predicted peptide gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRRQRQPSRRAPKTLFRAHQPDSDESISDDDVFPNNAPSLHPTNKQELPLLVRLDILKGISNQNLNGKGNTSSFEKPLEDEVEMPDFNEGEVVANSTDEENNSADGLQKYGPRSIRNEQVRNRNRISEVLLHSKESASASHATYSKANTSGIKKAKPRFSLASVLCKSGGIDHSISNIESFPEIIKAVDPRASANLDGNHLDDDDRIEINSDIEPAETEALPHEFNMAPIADLFDNLQDKAHQETVIDSEDSPESVDSESSSDKEVSDQHMKITFPGKKMQTIAERFEEALGTSSVITEGTHVGAPNSLRPGIFGKLQHMMLKVKETDMEFWKKLQPEARPDGELGCIDVKIISRYRDGKLTVCHCSFGKYTENFLLQDNSKGMRFGGSECSQSTIIFSPRVCNNVDLEVGSLIRIHPPWQSTIVWVQKWINRSNSPNSICHI* >Glyma13g11311.2 sequence type=predicted peptide gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRRQRQPSRRAPKTLFRAHQPDSDESISDDDVFPNNAPSLHPTNKQELPLLVRLDILKGISNQNLNGKGNTSSFEKPLEDEVEMPDFNEGEVVANSTDEENNSADGLQKYGPRSIRNEQVRNRNRISEVLLHSKESASASHATYSKANTSGIKKAKPRFSLASVLCKSGGIDHSISNIESFPEIIKAVDPRASANLDGNHLDDDDRIEINSDIEPAETEALPHEFNMAPIADLFDNLQDKAHQETVIDSEDSPESVDSESSSDKEVSDQHMKITFPGKKMQTIAERFEEALGTSSVITEGTHVGAPNSLRPGIFGKLQHMMLKVKETDMEFWKKLQPEARPDGELGCIDVKIISRYRDGKLTVCHCSFGKYTENFLLQDNSKGMRFGGSECSQSTIIFSPRVCNNVDLEVGSLIRIHPPWKEVQAGNDNVILCTYFSEILFPV* >Glyma13g11311.3 sequence type=predicted peptide gene model=Glyma13g11311 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRRQRQPSRRAPKTLFRAHQPDSDESISDDDVFPNNAPSLHPTNKQELPLLVRLDILKGISNQNLNGKGNTSSFEKPLEDEVEMPDFNEGEVVANSTDEENNSADGLQKYGPRSIRNEQVRNRNRISEVLLHSKESASASHATYSKANTSGIKKAKPRFSLASVLCKSGGIDHSISNIESFPEIIKAVDPRASANLDGNHLDDDDRIEINSDIEPAETEALPHEFNMAPIADLFDNLQDKAHQETVIDSEDSPESVDSESSSDKEVSDQHMKITFPGKKMQTIAERFEEALGTSSVITEGTHVGAPNSLRPGIFGKLQHMMLKVKETDMEFWKKLQPEARPDGELGCIDVKIISRYRDGKLTVCHCSFGKYTENFLLQDNSKGMRFGGSECSQSTIIFSPRVCNNVDLEVGSLIRIHPPWQSTIVWVQKWINRSNSPNSICHI*
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