|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G32270 | AT | Annotation by Michelle Graham. TAIR10: zinc transporter 3 precursor | chr2:13704278-13706612 FORWARD LENGTH=339 | SoyBase | E_val: 8.00E-28 | ISS |
GO:0006826 | GO-bp | Annotation by Michelle Graham. GO Biological Process: iron ion transport | SoyBase | N/A | ISS |
GO:0006829 | GO-bp | Annotation by Michelle Graham. GO Biological Process: zinc ion transport | SoyBase | N/A | ISS |
GO:0006833 | GO-bp | Annotation by Michelle Graham. GO Biological Process: water transport | SoyBase | N/A | ISS |
GO:0010106 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular response to iron ion starvation | SoyBase | N/A | ISS |
GO:0010167 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to nitrate | SoyBase | N/A | ISS |
GO:0015706 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nitrate transport | SoyBase | N/A | ISS |
GO:0030001 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metal ion transport | SoyBase | N/A | ISS |
GO:0048767 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root hair elongation | SoyBase | N/A | ISS |
GO:0055085 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transmembrane transport | SoyBase | N/A | ISS |
GO:0071577 | GO-bp | Annotation by Michelle Graham. GO Biological Process: zinc ion transmembrane transport | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0005385 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: zinc ion transmembrane transporter activity | SoyBase | N/A | ISS |
GO:0046873 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metal ion transmembrane transporter activity | SoyBase | N/A | ISS |
PTHR11040 | Panther | ZINC-IRON TRANSPORTER | JGI | ISS | |
PTHR11040:SF1 | Panther | ZINC/IRON TRANSPORTER | JGI | ISS | |
PF02535 | PFAM | ZIP Zinc transporter | JGI | ISS | |
UniRef100_G7J824 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Zinc transporter n=1 Tax=Medicago truncatula RepID=G7J824_MEDTR | SoyBase | E_val: 1.00E-35 | ISS |
UniRef100_I1LXL2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LXL2_SOYBN | SoyBase | E_val: 4.00E-56 | ISS |
Glyma13g10780 not represented in the dataset |
Glyma13g10780 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g10780.2 sequence type=CDS gene model=Glyma13g10780 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GAAGTGAAATTATTACACGCAAATTTCAAGAGGTTATCTATTACAATAATGGGGTTGTTCTTAGCTTTAACTACTCCAATGGGGATTGGAATTGGCATAGGGATCACTAATGTTTATGATGAAAATAGTCCAACTGCCCTTATTGTGGAAGGAATCTTCAATGCAGCATCGGCTGAGATCTTAATCTACGTGGCACGGATAGATCTTCTTGCAGCAGATTTTAAAAATCCAAGAATGAAAAAAACTGGTAGCCTTCTAATATTTTTTTAA
>Glyma13g10780.2 sequence type=predicted peptide gene model=Glyma13g10780 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high EVKLLHANFKRLSITIMGLFLALTTPMGIGIGIGITNVYDENSPTALIVEGIFNAASAEILIYVARIDLLAADFKNPRMKKTGSLLIFF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||