Report for Sequence Feature Glyma13g10760
Feature Type: gene_model
Chromosome: Gm13
Start: 12903795
stop: 12916575
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma13g10760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G22290 AT
Annotation by Michelle Graham. TAIR10: Endoplasmic reticulum vesicle transporter protein | chr3:7882082-7885260 FORWARD LENGTH=354
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005783 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
KOG2667
KOG
COPII vesicle protein
JGI ISS
PTHR10984 Panther
SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN NY-BR-84-RELATED
JGI ISS
PTHR10984:SF25 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF07970 PFAM
Endoplasmic reticulum vesicle transporter
JGI ISS
UniRef100_I1LXL0 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LXL0_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q94K91 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Endoplasmic reticulum vesicle transporter protein n=2 Tax=Arabidopsis thaliana RepID=Q94K91_ARATH
SoyBase E_val: 0 ISS
Expression Patterns of Glyma13g10760
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma13g10760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.13g004100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma13g10760
Coding sequences of Glyma13g10760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma13g10760.1 sequence type=CDS gene model=Glyma13g10760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGAATGAAACAAGTCATTAAAAACCTCGACGCCTTTCCTCGCGCCGAGGATCACTTGTTGCAGAAAACCCAATCTGGGGCTCTCGTATCCGTAATTGGTTTGATTATAATGGCCACATTGTTTGTGCACGAGCTCGGTTATTATCTTACAACTTACACCGTTCACAAGATGTCAGTGGACTTGAAGCGAGGGGAAACTCTTCCAATTCATATTAACATGACGTTTCCTTCTTTACCTTGTGATGTTTTGAGTGTAGACGCCATTGATATGTCGGGCAAGCACGAGGTGGATCTTGATACGAACATATGGAAACTTCGCTTGAACAGTTATGGCCATATAATTGGCACTGAATATATATCTGATCTTGTTGAAAAGGAACATACCAATCAAGAGCATGATGATAATAAAGATCATGATCATCATCATGAGCATTCAGAACAGAAGATTCATTTGCAAAACCTTGATGAATCTACTGAAAATATTATCAAGAAAGTGAAGGAAGCATTAAAAAATGGGGAAGGATGCCGGGTTTATGGTGTTTTAGATGTTCAAAGGGTTGCTGGAAATTTCCATATTTCAGTACATGGACTAAATATATATGTTGCACAAATGATCTTCGATGGAGCAAAGAATGTGAATGTAAGTCATTTCATCCATGATTTATCATTTGGCCCCAAATATCCAGGACTTCACAACCCACTTGATGACACAACAAGGATTCTGCATGATACCAGTGGAACATTTAAATATTATATAAAGGTAGTTCCAACCGAATATAGATATATCTCAAAAGAAGTTCTACCAACTAATCAGTTCTCAGTATCAGAATATTATTCCCCCATTAATCAGTTTGATCGGACCTGGCCAGCTGTCTACTTTTTGTATGATCTATCACCAATTACTGTCACTATCAAGGAAGAGCGCCGTAGTTTTCTTCATTTTATTACTCGGCTTTGTGCTGTGCTAGGTGGAACCTTTGCTGTGACAGGAATGCTGGACCGTTGGATGTACAGACTTCTTGAAGCTTTGACTAAATCAAAGTCTAAACGGTAG
Predicted protein sequences of Glyma13g10760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma13g10760.1 sequence type=predicted peptide gene model=Glyma13g10760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGMKQVIKNLDAFPRAEDHLLQKTQSGALVSVIGLIIMATLFVHELGYYLTTYTVHKMSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYISDLVEKEHTNQEHDDNKDHDHHHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLEALTKSKSKR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
