|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G10050 | AT | Annotation by Michelle Graham. TAIR10: L-O-methylthreonine resistant 1 | chr3:3099164-3101741 REVERSE LENGTH=592 | SoyBase | E_val: 2.00E-32 | ISS |
GO:0006094 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gluconeogenesis | SoyBase | N/A | ISS |
GO:0006520 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular amino acid metabolic process | SoyBase | N/A | ISS |
GO:0006566 | GO-bp | Annotation by Michelle Graham. GO Biological Process: threonine metabolic process | SoyBase | N/A | ISS |
GO:0007010 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cytoskeleton organization | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0009097 | GO-bp | Annotation by Michelle Graham. GO Biological Process: isoleucine biosynthetic process | SoyBase | N/A | ISS |
GO:0010498 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteasomal protein catabolic process | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0004794 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: L-threonine ammonia-lyase activity | SoyBase | N/A | ISS |
GO:0030170 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: pyridoxal phosphate binding | SoyBase | N/A | ISS |
PF00585 | PFAM | C-terminal regulatory domain of Threonine dehydratase | JGI | ISS | |
UniRef100_D2DKF2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Threonine deaminase (Fragment) n=1 Tax=Glycine max RepID=D2DKF2_SOYBN | SoyBase | E_val: 6.00E-44 | ISS |
UniRef100_UPI000233B25B | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233B25B related cluster n=1 Tax=unknown RepID=UPI000233B25B | SoyBase | E_val: 2.00E-59 | ISS |
Glyma13g10470 not represented in the dataset |
Glyma13g10470 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g10470.1 sequence type=CDS gene model=Glyma13g10470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATATATCATGACCAGAGAGTGATTTTGGACCAGGTTGGGGAATTTGCAGATGGTGTAGCTGTTAAAGAGGAGTTGATAGATGGGGTTGTTCTTGTAAGCCGTGATTCAATTTGTTGTTCAGTTGGAGTTTTTATTGGTCCAAATGTAGCTCTTCTATTCGGGAAAGATATTGTAGTGAAAACCAGAGAAGCACACATGAATTTTGATTTGATAAACTTCGGGTTGTTGTGCTGGCAACTGTTATGGCAGAGGAGCCTGGCAGTTTCAAAAAATTTGCGAATTGGACAGATCAACATCACAGAATTCAAATACAAATATAACTTGAATGAGGCGGTTGTCCTTTGCGGTGTTGGGGTTCACATAGTTTCCGAACTAAGAGCAATGCAGGAGAGGATGGAATCTTCTCAGCTCAAAACTTACAATCTCACAGAAAGTGACATGGTGAAAAATCACTTGTGTTACTTG
>Glyma13g10470.1 sequence type=predicted peptide gene model=Glyma13g10470 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high IYHDQRVILDQVGEFADGVAVKEELIDGVVLVSRDSICCSVGVFIGPNVALLFGKDIVVKTREAHMNFDLINFGLLCWQLLWQRSLAVSKNLRIGQINITEFKYKYNLNEAVVLCGVGVHIVSELRAMQERMESSQLKTYNLTESDMVKNHLCYL
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||