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Report for Sequence Feature Glyma13g09781

Feature Type:gene_model
Chromosome:Gm13
Start:11381659
stop:11382666
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g09781
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G18250AT Annotation by Michelle Graham. TAIR10: receptor serine/threonine kinase, putative | chr4:10087343-10091963 REVERSE LENGTH=853 SoyBaseE_val: 2.00E-87ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0004675GO-mf Annotation by Michelle Graham. GO Molecular Function: transmembrane receptor protein serine/threonine kinase activity SoyBaseN/AISS
GO:0004713GO-mf Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
KOG0192 KOG Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs JGI ISS
PTHR24420Panther FAMILY NOT NAMED JGI ISS
PTHR24420:SF441Panther SUBFAMILY NOT NAMED JGI ISS
PF00069PFAM Protein kinase domain JGI ISS
UniRef100_C6FF75UniRef Annotation by Michelle Graham. Most informative UniRef hit: Stress-induced receptor-like kinase n=1 Tax=Glycine max RepID=C6FF75_SOYBN SoyBaseE_val: 0ISS
UniRef100_I1LXE8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LXE8_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma13g09781
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g09781 not represented in the dataset
Glyma13g09781 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g09781 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g033100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g09781
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g09781
>Glyma13g09781.1   sequence type=CDS   gene model=Glyma13g09781   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTACATAAAGCAAAAGGTAGCGGCCAATACTTTATTAGTGAAATTGCAACAATTGGAAGAATACATCTTCACAATGTAGTACAATTAATTGGAAATTGTGTTGAAGGCTTAAAACGTGCCCTTGTTTATGAATTCATGCCCAATGGATCACTTGAAAAATTTATTTTTACCAAAGATGGAAATATATATTTAACATATGACAAAATATATAATATAGCAATTGGAGTAGCTCGTGGGATTGCTTATCTCCATCATGGGTGCGAGATGCAAATTTTGCATTTTGATATCAAACCCCATAACATCCTTCTTGATGAAACATTCACCCCAAAGGTCTCTGACTTTGGATTGGCAAAACTATATCCAATAGATAATAGCATTGTGACTATGGCAACGGCAAGAGGAACAATTGGGTATATGGCTCTAGAATTATTTTATAAAAATATTGGAGGAATATCCCACAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATAGAGATGGCAAGTAAGAGGAAGAACCTAAATCCCCATGCAGATCATTCAAGTCGACTTTACTTTCCCTTTTGGATTTATAATCAACTTGGAAAAGAGACAGATATAGAAATGGAAGGTGTCACAGAGGAGGAAAATAAAATAGCAAAAAAGATGATCATTGTTTCACTTTGGTGTGTACAGTTGAAACCAAGCGATCGTCCCTCAATGAACAAAGTAGTGGAAATGCTTGAAGGAGACATTGAAAGCCTGGAAATACCTCCAAAGCCTTCTCTATATCCACATGAGACAATGGAAAATGATCAAAGCATCTACTCTAGTCAAACAATGTCAACAGACTTCATTAGTTCTTCTAGTTATTCCAAGGAAATTGTGACTAATCCTTTGGTAGAGGATGCTATTTGA
Predicted protein sequences of Glyma13g09781
>Glyma13g09781.1   sequence type=predicted peptide   gene model=Glyma13g09781   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLHKAKGSGQYFISEIATIGRIHLHNVVQLIGNCVEGLKRALVYEFMPNGSLEKFIFTKDGNIYLTYDKIYNIAIGVARGIAYLHHGCEMQILHFDIKPHNILLDETFTPKVSDFGLAKLYPIDNSIVTMATARGTIGYMALELFYKNIGGISHKADVYSFGMLLIEMASKRKNLNPHADHSSRLYFPFWIYNQLGKETDIEMEGVTEEENKIAKKMIIVSLWCVQLKPSDRPSMNKVVEMLEGDIESLEIPPKPSLYPHETMENDQSIYSSQTMSTDFISSSSYSKEIVTNPLVEDAI*






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