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Report for Sequence Feature Glyma13g09200

Feature Type:gene_model
Chromosome:Gm13
Start:10207313
stop:10207899
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g09200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G40230AT Annotation by Michelle Graham. TAIR10: HXXXD-type acyl-transferase family protein | chr2:16803285-16804586 REVERSE LENGTH=433 SoyBaseE_val: 2.00E-57ISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0016740GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity SoyBaseN/AISS
GO:0016747GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups SoyBaseN/AISS
UniRef100_G7JBV7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Taxadien-5-alpha-ol O-acetyltransferase n=1 Tax=Medicago truncatula RepID=G7JBV7_MEDTR SoyBaseE_val: 8.00E-70ISS
UniRef100_I1LMT4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LMT4_SOYBN SoyBaseE_val: 2.00E-99ISS

Expression Patterns of Glyma13g09200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g09200 not represented in the dataset
Glyma13g09200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g09200 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma13g09200
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g09200
>Glyma13g09200.1   sequence type=CDS   gene model=Glyma13g09200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTGAGACCAACTTGCATTGTGTTTAACGAGAGGCGGATCAACGCTCTAAAGGGCGTGTGCAGAATGTCGTCACACACGTCGTTCGAGGTTCTGGTGGCCCACATGTGGAGGAGTTGGGCGAGGGTGATGGGGTTTCTTCCTAAAAACCAGACGCTGAAGCTTTTGACTACCAGAGGGGTATTGTGGGAATGCGCACAAACAAGCGCGTGGGAGTTGGGGGAGAGAGGGGTCAGGTACGGGTCGGGTCTGGTGAAGCGTGCGAAGGAGAGGGTGGACAATGTGCACGTGTGGAGGGTGGTTGAGTTGGTGTCCAAGTTGAGGGTGAGTCCTAACTCGGTGGGGGTGTTGATTCTGTCGCAGTGGTCGAGGCTGGGTCTTGAGAGGGTTGAACTTAGGATGGGGAAGCCTCTGCATGTGGGGCCCATATGTTGTGATAGGTACTGCTTGTTTCTTCCGGTGACCGGTGAACGGCCGAGTGTGAAGGTCATGGTGGCTGTCCCCACCATCACCATCGACAACTTTCACCGTTTCCTTCGGGAATCGAATTTATGA
Predicted protein sequences of Glyma13g09200
>Glyma13g09200.1   sequence type=predicted peptide   gene model=Glyma13g09200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
LRPTCIVFNERRINALKGVCRMSSHTSFEVLVAHMWRSWARVMGFLPKNQTLKLLTTRGVLWECAQTSAWELGERGVRYGSGLVKRAKERVDNVHVWRVVELVSKLRVSPNSVGVLILSQWSRLGLERVELRMGKPLHVGPICCDRYCLFLPVTGERPSVKVMVAVPTITIDNFHRFLRESNL*






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