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Report for Sequence Feature Glyma13g08720

Feature Type:gene_model
Chromosome:Gm13
Start:9280642
stop:9282231
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma13g08720
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G43350AT Annotation by Michelle Graham. TAIR10: phosphate transporter 1;1 | chr5:17399918-17401643 REVERSE LENGTH=524 SoyBaseE_val: 0ISS
GO:0006817GO-bp Annotation by Michelle Graham. GO Biological Process: phosphate ion transport SoyBaseN/AISS
GO:0016036GO-bp Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation SoyBaseN/AISS
GO:1901684GO-bp Annotation by Michelle Graham. GO Biological Process: arsenate ion transmembrane transport SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0005315GO-mf Annotation by Michelle Graham. GO Molecular Function: inorganic phosphate transmembrane transporter activity SoyBaseN/AISS
GO:0005351GO-mf Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity SoyBaseN/AISS
GO:0015114GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphate ion transmembrane transporter activity SoyBaseN/AISS
GO:0015144GO-mf Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity SoyBaseN/AISS
GO:1901683GO-mf Annotation by Michelle Graham. GO Molecular Function: arsenate ion transmembrane transporter activity SoyBaseN/AISS
KOG0252 KOG Inorganic phosphate transporter JGI ISS
PTHR24064Panther FAMILY NOT NAMED JGI ISS
PTHR24064:SF16Panther SUBFAMILY NOT NAMED JGI ISS
PF00083PFAM Sugar (and other) transporter JGI ISS
UniRef100_E8Z9B1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Phosphate transporter1-13 n=1 Tax=Glycine max RepID=E8Z9B1_SOYBN SoyBaseE_val: 0ISS
UniRef100_E8Z9B1UniRef Annotation by Michelle Graham. Best UniRef hit: Phosphate transporter1-13 n=1 Tax=Glycine max RepID=E8Z9B1_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma13g08720
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma13g08720 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.13g040200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma13g08720
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma13g08720
>Glyma13g08720.1   sequence type=CDS   gene model=Glyma13g08720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCACTGGAAGTGCTTGAAGCGCTCGATTCAGCGCGCACGCAATGGTACCACGTGACGGCCATTGTTATAGCGGGCATGGGCTTCTTCACTGATGCCTATGACCTTTTCTGTATCTCAACGGTTTCGAAACTTTTGGGACGGTTGTACTATTTTGACCCGAGCACCCCAACGGTGCCTGGAAAGCTCCCGCTGAACGTGAACAACATGGTCACCGGTGTCGCACTCGTTGGGACCCTCAGTGGCCAGCTCGTCTTTGGCTGGCTCGGAGACAAGCTCGGCCGGAAAAAAGTTTACGGTATCACCCTGATCCTCATGGTGTTCTGCGCCATTTGCTCTGGACTATCGTTCGGGGCAACAGCGAAGTCTGTCATGGGGACGCTCTGCTTCTTCCGCTTCTGGCTCGGCTTCGGCATCGGCGGAGACTACCCGCTCTCCGCCACCATCATGTCGGAGTACGCCAACAAGCGGACACGCGGCGCATTTATAGCAGCCGTGTTCGCCATGCAAGGTGTGGGGATCATTTTCGCGGGTTTAGTCTCCATGGCCCTCTCAGGAATCTTTAAATACTACTACCCTGCCCCAGCGTACATCGATAATCCTGTCTTGTCCACACAACCCGAGGGTGACCTTTTGTGGCGGCTTGTTCTCATGATTGGATCTGTCCCTGCGATGTTGACTTACTATTGGCGAATGAAAATGCCGGAGACGGGGCGTTACACCGCCATCATCGAAGGAAACGTGAAGCAAGCCGCCGCCGACATGGCGAAAGTCTTGGACATAGAGATCCAGGCTGAGCAAGATAAGTTGGCGGAATTCAATGCTAACAATAACTACCCACTCTGGTCAAACGAGTTCTTCAAGCGACATGGACGCCACTTGATAGGAACAATGAGTTCATGGTTTTTGTTAGATATTGCGTTCTACAGCCAAAACTTAACGCAGAAGGATATTTTCCCTGCGGTTGGGCTCATACACAAAGACTTTGAAATGGACGCTATTAGGGAAGTGTTCGAGACGTCACGTGCCATGTTCGTGATCGCGTTGCTGGGAACATTCCCAGGGTATTGGTTCACTGTTTTCTTCATTGAGAAGATTGGAAGGTACAAGATCCAACTTATTGGGTTCTTCATGATGTCGTTCTTCATGTTCATCATTGGGGTGAAGTACGATTATCTCAAGAACGAGGGCAAAGGCTACTTTGCGCTCTTATACGGATTAACGTTCTTTTTTGCTAACTTTGGACCCAATAGCACGACGTTCGTGCTGCCCGCCGAGCTTTTCCCGACGCGCGTGAGAAGCACGTGTCACGCCCTTAGCGCTGCGGCGGGAAAAGCCGGGGCCCTCGTGGGGACATTCGGAATACAAAGTTTGACTGTGGGTGGTCAATCATACAAGATTAAAAAGGTGATGATTATTCTGGCGGTGACAAACTTGTTAGGGTTCTTCTCTTCGTTTTTGGTTACTGAAACGAAGGGACGGTCCTTGGAAGAGATTTCTGGGGAGGATGGGAGAGAGAGTGAACTCACGCCAACGCCCAATAATAGGATTCAGGGTAGGATTCAGGGTTCAAGGACTGAGACAATGTGA
Predicted protein sequences of Glyma13g08720
>Glyma13g08720.1   sequence type=predicted peptide   gene model=Glyma13g08720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSTPTVPGKLPLNVNNMVTGVALVGTLSGQLVFGWLGDKLGRKKVYGITLILMVFCAICSGLSFGATAKSVMGTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMALSGIFKYYYPAPAYIDNPVLSTQPEGDLLWRLVLMIGSVPAMLTYYWRMKMPETGRYTAIIEGNVKQAAADMAKVLDIEIQAEQDKLAEFNANNNYPLWSNEFFKRHGRHLIGTMSSWFLLDIAFYSQNLTQKDIFPAVGLIHKDFEMDAIREVFETSRAMFVIALLGTFPGYWFTVFFIEKIGRYKIQLIGFFMMSFFMFIIGVKYDYLKNEGKGYFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGALVGTFGIQSLTVGGQSYKIKKVMIILAVTNLLGFFSSFLVTETKGRSLEEISGEDGRESELTPTPNNRIQGRIQGSRTETM*






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