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Report for Sequence Feature Glyma13g04571

Feature Type:gene_model
Chromosome:Gm13
Start:4894248
stop:4894808
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G14930AT Annotation by Michelle Graham. TAIR10: senescence-associated gene 101 | chr5:4828754-4830769 FORWARD LENGTH=537 SoyBaseE_val: 1.00E-46ISS
GO:0006629GO-bp Annotation by Michelle Graham. GO Biological Process: lipid metabolic process SoyBaseN/AISS
GO:0007568GO-bp Annotation by Michelle Graham. GO Biological Process: aging SoyBaseN/AISS
GO:0009627GO-bp Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance SoyBaseN/AISS
GO:0009697GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process SoyBaseN/AISS
GO:0009863GO-bp Annotation by Michelle Graham. GO Biological Process: salicylic acid mediated signaling pathway SoyBaseN/AISS
GO:0010200GO-bp Annotation by Michelle Graham. GO Biological Process: response to chitin SoyBaseN/AISS
GO:0030968GO-bp Annotation by Michelle Graham. GO Biological Process: endoplasmic reticulum unfolded protein response SoyBaseN/AISS
GO:0031348GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response SoyBaseN/AISS
GO:0045087GO-bp Annotation by Michelle Graham. GO Biological Process: innate immune response SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0004806GO-mf Annotation by Michelle Graham. GO Molecular Function: triglyceride lipase activity SoyBaseN/AISS
UniRef100_G7KJC3UniRef Annotation by Michelle Graham. Most informative UniRef hit: SAG101 n=1 Tax=Medicago truncatula RepID=G7KJC3_MEDTR SoyBaseE_val: 5.00E-70ISS
UniRef100_I1LWE8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1LWE8_SOYBN SoyBaseE_val: 1.00E-132ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma13g04571 not represented in the dataset

Glyma13g04571 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma13g04571.1   sequence type=CDS   gene model=Glyma13g04571   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTGAAGAAGTAGAGATGAAGCCTCAGAAAGAAGTTGCAGCTTTTCACACCCGCTGGCTTTATGGTGGGACTAATTACAGGAGAATGGTTGAACCCCTTGCTATTGCTCAATACTATAGAGATGGGGGTAAAGAGTATATGACTCAAAATAGGTCTAAACACTTTGTACAGTTGGAGGAATGGTTAAACGAAGAGACAAAAAAAGCCACAAGTGATTTAAGCAGTACAAGTAAGAAGAATGTGGAAGCACTTTTAACTTTTGACTCTTGCTTTTGGGCACATGTTGAAGAGGCTCTCCTTTCATGCAAGGAGTTGGAGGTTGTGAGAGAGAAGGAAGAGACGTTGAAGAAATTGGTTGAATTTGAGGAGTATGTTTATGAGTTGCTCAGGAATTATGTTGTATCACCAGAGATTTTCTTGGCGCAAAGCAGCTACATGCGTTGGTGGAATAAGTATCAAGCAATTAAGGGAACTTCATATAATTCAACACTCACAAGTTTCATGAATGATGCAAGGAAGCGTGAGCAGTATACTTTGGGAGCTTATGATTTCCCTTGA

>Glyma13g04571.1   sequence type=predicted peptide   gene model=Glyma13g04571   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVEEVEMKPQKEVAAFHTRWLYGGTNYRRMVEPLAIAQYYRDGGKEYMTQNRSKHFVQLEEWLNEETKKATSDLSSTSKKNVEALLTFDSCFWAHVEEALLSCKELEVVREKEETLKKLVEFEEYVYELLRNYVVSPEIFLAQSSYMRWWNKYQAIKGTSYNSTLTSFMNDARKREQYTLGAYDFP*







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