|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G22190 | AT | Annotation by Michelle Graham. TAIR10: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:9433897-9436482 REVERSE LENGTH=354 | SoyBase | E_val: 3.00E-19 | ISS |
GO:0005992 | GO-bp | Annotation by Michelle Graham. GO Biological Process: trehalose biosynthetic process | SoyBase | N/A | ISS |
GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0004805 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: trehalose-phosphatase activity | SoyBase | N/A | ISS |
PTHR10788 | Panther | TREHALOSE-6-PHOSPHATE SYNTHASE | JGI | ISS | |
PF02358 | PFAM | Trehalose-phosphatase | JGI | ISS | |
UniRef100_D9ILX3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Trehalose-6-phosphate phosphatase n=1 Tax=Medicago sativa RepID=D9ILX3_MEDSA | SoyBase | E_val: 7.00E-20 | ISS |
UniRef100_UPI0002336F71 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI0002336F71 related cluster n=1 Tax=unknown RepID=UPI0002336F71 | SoyBase | E_val: 2.00E-24 | ISS |
Glyma13g03681 not represented in the dataset |
Glyma13g03681 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g03681.1 sequence type=CDS gene model=Glyma13g03681 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTAAGTACATTGAAGGTCCAACTTTTTGACACCACCCTGGGAACTAGAAGTCCCATCAGGCACCATAAGCGAAATGTAAGCCCCAATCTTTATCACCCTTCAGCTCTGAACACCTTTGAACAGATAGTATATAGTGCCAAAGGAAAGCAAATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCTCCAATTGTTGCAGATCCGGATAAGGCTTTCATGACTAGAAAGATTTTCCTTTTGTTCCCATTTTTCTCTTATACTCATATCCATTGA
>Glyma13g03681.1 sequence type=predicted peptide gene model=Glyma13g03681 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLSTLKVQLFDTTLGTRSPIRHHKRNVSPNLYHPSALNTFEQIVYSAKGKQIVVFLDYDGTLSPIVADPDKAFMTRKIFLLFPFFSYTHIH*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||