|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G17460 | AT | Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5757582-5758867 REVERSE LENGTH=309 | SoyBase | E_val: 7.00E-132 | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
UniRef100_Q9AWU7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: P0044F08.15 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q9AWU7_ORYSJ | SoyBase | E_val: 6.00E-107 | ISS |
UniRef100_UPI000233BDCF | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233BDCF related cluster n=1 Tax=unknown RepID=UPI000233BDCF | SoyBase | E_val: 0 | ISS |
Glyma13g03351 not represented in the dataset |
Glyma13g03351 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.13g079200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma13g03351.1 sequence type=CDS gene model=Glyma13g03351 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGATGTAGGTCATTCTCCTACAATAGTCTCTTTCCATCTCTTATAAGGGTTGCAAAGTCACATTGGCTACCACTCTCTCAAAGGTCAAAAGTGGTTTATGATTCAGGCTCAAGCGTACTACAAAATTGTTGCAACAGTGGTTCCCTGGTGAATTTTCAAGCTTTGAGATCATATGCACGTGATGCACGCAAAGGCTATAATCTCTTTGGCCGGGGAAGACCAGGGGATGAAGAGTTCAAGAAAACCTGGGCAAACGAAATGGATGAAGATAACACTCTATGGACTGGAAGTGAGGATGATAACGATGAAGACATGGGTCCAAAGACGGATCTTGATAAGGAGATAAGGAAAGCAAGACTGGAGGCTAAAAAGCATGCAGACTTGATTGATGCTGATGACAGCGATGAGTTAAGAAGTGTCTGGTCTGGCAGTGACGAGGAGAAGACACTGTGGACTGGTGATGAAATGGATAGTGATGATGATATTCCTACAGAAGCTTACCCAAGTGAAAGTAGTGACAAGTACATAGATAAATTGTTTGAGTTTGATGAAATGCCGAAATACAGAACCATCTCTGAGATGTTGAAAGCTGAACAAGAACCCGAGGAGTTGACTCCAGGAAAGCAAGCTAGGAAGATAGCTGTTGAGAATGCTTTGAAGAAATTAAAGAAGGGTCCAGATGGGAGGTATAGCAATGTGTGGGAGGTTATGAGTGACTTAGATATTCTAATTGGGGCATTTGAAAATGTTGTTTCAGGACCAGAATATGCAGAACTTAGACAAGGAGGGCCTAAACATCTAAATATTCAGTTTTTTAAGGACATACAAGCACGTATGAGAGATCCAAATTACAAGTTCTCACCTGAGTTAAAATTGAAACCAAAGAGTAAACTGGTTTCTAGAAAGAAATGGCAAAAAGCAGAGTCCAGAAGAAGGAAAGCACGAAAGAGATAA
>Glyma13g03351.1 sequence type=predicted peptide gene model=Glyma13g03351 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGCRSFSYNSLFPSLIRVAKSHWLPLSQRSKVVYDSGSSVLQNCCNSGSLVNFQALRSYARDARKGYNLFGRGRPGDEEFKKTWANEMDEDNTLWTGSEDDNDEDMGPKTDLDKEIRKARLEAKKHADLIDADDSDELRSVWSGSDEEKTLWTGDEMDSDDDIPTEAYPSESSDKYIDKLFEFDEMPKYRTISEMLKAEQEPEELTPGKQARKIAVENALKKLKKGPDGRYSNVWEVMSDLDILIGAFENVVSGPEYAELRQGGPKHLNIQFFKDIQARMRDPNYKFSPELKLKPKSKLVSRKKWQKAESRRRKARKR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||