Report for Sequence Feature Glyma12g29330
Feature Type: gene_model
Chromosome: Gm12
Start: 32748854
stop: 32756749
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma12g29330
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G61560 AT
Annotation by Michelle Graham. TAIR10: Seven transmembrane MLO family protein | chr1:22708875-22712032 REVERSE LENGTH=583
SoyBase E_val: 0 ISS
GO:0006952 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response
SoyBase N/A ISS
GO:0008219 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell death
SoyBase N/A ISS
GO:0009817 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus, incompatible interaction
SoyBase N/A ISS
GO:0052542 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response by callose deposition
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0005516 GO-mf
Annotation by Michelle Graham. GO Molecular Function: calmodulin binding
SoyBase N/A ISS
PF03094 PFAM
Mlo family
JGI ISS
UniRef100_I1LTG8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: MLO-like protein n=1 Tax=Glycine max RepID=I1LTG8_SOYBN
SoyBase E_val: 0 ISS
UniRef100_UPI000233C29F UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233C29F related cluster n=1 Tax=unknown RepID=UPI000233C29F
SoyBase E_val: 0 ISS
Expression Patterns of Glyma12g29330
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma12g29330 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.12g171300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma12g29330
Coding sequences of Glyma12g29330
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma12g29330.1 sequence type=CDS gene model=Glyma12g29330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGAGGAAAAACCTTACAGGAAACACCTACATGGGCTGTGGCCGTTGTTTGCTTCGTTTTGCTCTCCATATCTATCTTGATCGAGCACATCCTGCATCTCATTGGAAAGTGGTTGAAGAAGAAGCACAAGAGAGCTCTATGCGAGGCACTCGAAAAGATCAAATCAGAGCTTATGCTATTGGGGTTCATATCGTTGCTCCTAACGGTAGGACAAGGTCTAATATCGAGGATATGTATATCAGAAAAGGTTGCGGGGACATTTCACCCCTGTCCAAAAAAATACTATAAGAAGAAGGAAGAGTCAGAGCACCGAACCAATAATGGTCGGAGATTACTAGCGGCTTTTCTCGATTCCGATAACCAAAATCACCGTCGTATTTTGGCGGCGGGAGGTGGTGACAACTGTCCCCCGGGTAAAGTCCCGTTTGTCTCATCCGAGGGTATTCATCAACTCCATATATTTATCTTCGTGCTGGCTGTCTTTCATGTCCTTTACTGCATACTCACTCTAGCTCTGGGTAGAGCAAAGATGAGAAGGTGGAAACGATGGGAAGAGGAAACCAAGACAGCACAGTACCAATTTTCACACGATCCTGAACGATTTAGATTTGCGAGAGAAACATCATTTGGGAGAAGACACCTGAGTTTCTGGGCCCAAAATCCTGTCCTCCTCTGGATTGTTTGTTTCTTCAGGCAGTTTGTACGGTCAGTTCCTAAAGTGGATTACTTGACACTGAGGCATGGATTTATGATGGCACATTTGGGGCCTCATAGTCACCCGAAATTCGACTTTCGGCAATATATCAAAAGATCTTTGGAAGAGGACTTCAAAGTGGTCGTTGAAATCAGTACTCCAATCTGGTTCATCACAGTGCTTTTTCTCCTGGTTCACACGGATGGCTGGTACTCTTATTATTGGCTACCATTTGCTCCTTTGATCATTGTTCTATTAGTTGGAGCCAAGTTGCAAGTGATAATAACAAAGATGGGTCAAAGAATTCAACAACGAGGAGAGGTTGTAAAGGGAGTGCCACTGGTGCAACCTGGGGATGACCTTTTCTGGTTTAACAAACCTCGACTTACTCTCTACCTCATTAATTTCGTGCTCTTTCAGAATGCTTTTCAGCTTGCCTACTTTTCATGGACTGCGCTTCAATTTGGGATAAAATCCTGTTTCCATTCCCAAACGGAGGATGCGGTGATCAAAGTCACAATGGGGGTCCTCGTTCAATTCCTTTGCAGCTACGTAACTCTTCCTCTCTATGCTCTCGTGACACAGATGGGTTCAACAATGAAACCAACCATATTCAATGAAAGAGTAGCCAGAGCTCTAAGGAATTGGCACCACACAGCGAAGAAGCATGTAAAACAAAATCGTGGATTGCAATTGCAAACCCCTTCATCTGCACCCTCAACCCCAAATCAACCTAAGTCTCAGGCCAATCTCCTACGCCAGTGCCATAGTGAAATGTACACCTATCCCACTTCTCCAATAAGATTTGACTCAGAGGCCCATCATCCCTATGAGATTGACTCACCCCCATCCTCCATCTCACATCACCATAAGTCCAAGGTCAATGCTTCTTCTTCTAGTTCTATTCATCACCATGAAATAGAAATGGGTCACCTAGATCATGATCCGCCACAAAATATCAATGAGCCCAACTCAACCCTTGTGAGTTCAGGTTCGAATCAACACGAGATTGATATTGAACACAAGAAAGAATTTTCTTTTGAGAAAAGATGA
Predicted protein sequences of Glyma12g29330
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma12g29330.1 sequence type=predicted peptide gene model=Glyma12g29330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGGKTLQETPTWAVAVVCFVLLSISILIEHILHLIGKWLKKKHKRALCEALEKIKSELMLLGFISLLLTVGQGLISRICISEKVAGTFHPCPKKYYKKKEESEHRTNNGRRLLAAFLDSDNQNHRRILAAGGGDNCPPGKVPFVSSEGIHQLHIFIFVLAVFHVLYCILTLALGRAKMRRWKRWEEETKTAQYQFSHDPERFRFARETSFGRRHLSFWAQNPVLLWIVCFFRQFVRSVPKVDYLTLRHGFMMAHLGPHSHPKFDFRQYIKRSLEEDFKVVVEISTPIWFITVLFLLVHTDGWYSYYWLPFAPLIIVLLVGAKLQVIITKMGQRIQQRGEVVKGVPLVQPGDDLFWFNKPRLTLYLINFVLFQNAFQLAYFSWTALQFGIKSCFHSQTEDAVIKVTMGVLVQFLCSYVTLPLYALVTQMGSTMKPTIFNERVARALRNWHHTAKKHVKQNRGLQLQTPSSAPSTPNQPKSQANLLRQCHSEMYTYPTSPIRFDSEAHHPYEIDSPPSSISHHHKSKVNASSSSSIHHHEIEMGHLDHDPPQNINEPNSTLVSSGSNQHEIDIEHKKEFSFEKR*