|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G52882 | AT | Annotation by Michelle Graham. TAIR10: P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:21434155-21438362 REVERSE LENGTH=829 | SoyBase | E_val: 1.00E-39 | ISS |
PTHR23074 | Panther | AAA ATPASE | JGI | ISS | |
PTHR23074:SF20 | Panther | AAA-FAMILY ATPASE | JGI | ISS | |
UniRef100_B9RIQ4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO | SoyBase | E_val: 2.00E-44 | ISS |
UniRef100_I1LSB6 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1LSB6_SOYBN | SoyBase | E_val: 5.00E-72 | ISS |
Glyma12g14464 not represented in the dataset |
Glyma12g14464 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.12g123200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma12g14464.1 sequence type=CDS gene model=Glyma12g14464 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCTGGATTGTTTGGTTCCTTTTCAATGATTTCTTCAACAGAAGAAACAAAACGTACTAAAGGAAATAACAGTCAACTTTTACAGATCTTGGTTGGTCTTCCATCTGTTGAGTACAGGGAAATGATCTTGAAGACTCTTTTGGCTAAAGAAAAACATAAAAACTTGGACTTCAAAGAGCTGGCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGAGAGCTAAGACAGCAGGAGAGAATGAAGGACATGGAAAAGAAGAAAAGAGAAGCAGAAGGCCAAAGCTCTGAGGATGCTTCAAACAATAAAGATAAGGAAGAACAAGAAATTACCCTGACACCTTCAAACATGGAAGACATGAGACGGGCTAAGAGTCAGGTACGGTGA
>Glyma12g14464.1 sequence type=predicted peptide gene model=Glyma12g14464 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSGLFGSFSMISSTEETKRTKGNNSQLLQILVGLPSVEYREMILKTLLAKEKHKNLDFKELATMTEGYTGSDLKNLCITAAYRPVRELRQQERMKDMEKKKREAEGQSSEDASNNKDKEEQEITLTPSNMEDMRRAKSQVR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||