|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G21180 | AT | Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9074956-9075351 REVERSE LENGTH=131 | SoyBase | E_val: 1.00E-23 | ISS |
GO:0006661 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phosphatidylinositol biosynthetic process | SoyBase | N/A | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
UniRef100_C6TCC8 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6TCC8_SOYBN | SoyBase | E_val: 2.00E-86 | ISS |
UniRef100_D7LEB2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Oxidoreductase/ transition metal ion binding protein n=2 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LEB2_ARALL | SoyBase | E_val: 6.00E-07 | ISS |
Glyma12g02720 not represented in the dataset |
Glyma12g02720 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.12g024200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma12g02720.1 sequence type=CDS gene model=Glyma12g02720 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTTATGGTAGAAGCAGAGCCTCCTCTGTTTTGGATGGCTTCACTCTGAATCCCCTGCCGTATCCTGTTCTGTTAATCTTATCGCTGATCTTCATCTTCCTTGGCGTTTCATGGTACTTTTCCTACGAAGAAGTGGTTGAAACTGCTGAACAACAATTGGGTTGGTTACTTTTTTGCACCCCTGTGGTGCTAATTCTCATAGTTCGTTGGCTATCATCAATGGAAAATTCATATTGGTTCTTCTCTGCTTCATTACCGGGGGAAAGGCGGGGGCGAACTCACCAAGGCCTTTCAGAAGGGAGCTCTCCATGGGGTGTGGCTGCTTTGATCCTGGTGTTGCTGATAATGGTGCAATATCAATCCAACTTTCTGGATAGCTGGTTTGTTTGA
>Glyma12g02720.1 sequence type=predicted peptide gene model=Glyma12g02720 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAYGRSRASSVLDGFTLNPLPYPVLLILSLIFIFLGVSWYFSYEEVVETAEQQLGWLLFCTPVVLILIVRWLSSMENSYWFFSASLPGERRGRTHQGLSEGSSPWGVAALILVLLIMVQYQSNFLDSWFV*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||