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Report for Sequence Feature Glyma11g36082

Feature Type:gene_model
Chromosome:Gm11
Start:37621783
stop:37622397
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma11g36082
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G65205AT Annotation by Michelle Graham. TAIR10: NAD(P)-binding Rossmann-fold superfamily protein | chr5:26050926-26052017 REVERSE LENGTH=285 SoyBaseE_val: 8.00E-19ISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0016491GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity SoyBaseN/AISS
UniRef100_G7J4E1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Retinol dehydrogenase n=1 Tax=Medicago truncatula RepID=G7J4E1_MEDTR SoyBaseE_val: 7.00E-20ISS
UniRef100_UPI000233D57CUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233D57C related cluster n=1 Tax=unknown RepID=UPI000233D57C SoyBaseE_val: 5.00E-52ISS

Expression Patterns of Glyma11g36082
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g36082 not represented in the dataset
Glyma11g36082 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g36082 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.11g237100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma11g36082
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma11g36082
>Glyma11g36082.1   sequence type=CDS   gene model=Glyma11g36082   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTTTGGTGATCAGTGCCATGAGAATGATTCGGCTTGTTGTTCCCCATATGGCAACTTGGAAACAGGGAAAGATTCTCAACATTGGTGGTGTTAGTGCCTTGGCCTCTGGACTTTGGTCAGGCACTTACAATGCTTCTAAAGCTGCTCTTCATGCTTTCACAGATACATTAAGGGGGTTTTCTTCTTCTTCTTCTTCTTCTTCTAACTTACCCTACAGTACTTGTACCCTTCATGAATCATGTTAA
Predicted protein sequences of Glyma11g36082
>Glyma11g36082.1   sequence type=predicted peptide   gene model=Glyma11g36082   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFLVISAMRMIRLVVPHMATWKQGKILNIGGVSALASGLWSGTYNASKAALHAFTDTLRGFSSSSSSSSNLPYSTCTLHESC*






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