Report for Sequence Feature Glyma11g33240
Feature Type: gene_model
Chromosome: Gm11
Start: 35024046
stop: 35029231
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g33240
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G73370 AT
Annotation by Michelle Graham. TAIR10: sucrose synthase 6 | chr1:27584533-27588326 REVERSE LENGTH=942
SoyBase E_val: 0 ISS
GO:0001666 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to hypoxia
SoyBase N/A ISS
GO:0005985 GO-bp
Annotation by Michelle Graham. GO Biological Process: sucrose metabolic process
SoyBase N/A ISS
GO:0005986 GO-bp
Annotation by Michelle Graham. GO Biological Process: sucrose biosynthetic process
SoyBase N/A ISS
GO:0009058 GO-bp
Annotation by Michelle Graham. GO Biological Process: biosynthetic process
SoyBase N/A ISS
GO:0019375 GO-bp
Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process
SoyBase N/A ISS
GO:0080165 GO-bp
Annotation by Michelle Graham. GO Biological Process: callose deposition in phloem sieve plate
SoyBase N/A ISS
GO:0005618 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cell wall
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0008194 GO-mf
Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity
SoyBase N/A ISS
GO:0016157 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sucrose synthase activity
SoyBase N/A ISS
KOG0853
KOG
Glycosyltransferase
JGI ISS
PTHR12526 Panther
GLYCOSYLTRANSFERASE
JGI ISS
PTHR12526:SF27 Panther
SUCROSE SYNTHASE
JGI ISS
PF00534 PFAM
Glycosyl transferases group 1
JGI ISS
PF00862 PFAM
Sucrose synthase
JGI ISS
UniRef100_I1LM80 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Sucrose synthase n=1 Tax=Glycine max RepID=I1LM80_SOYBN
SoyBase E_val: 0 ISS
UniRef100_UPI000233CC91 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233CC91 related cluster n=1 Tax=unknown RepID=UPI000233CC91
SoyBase E_val: 0 ISS
Expression Patterns of Glyma11g33240
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma11g33240 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.11g212700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g33240
Coding sequences of Glyma11g33240
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g33240.1 sequence type=CDS gene model=Glyma11g33240 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCTTCACCGCTCTTGACAGGCAAAGAATTGGTAACCAATGACATGCCTGATAATGCAATGAGGCCAAGTTGGTACCATGTGAAGAGGTGCTTTGCTAAGTACATTGAGAAGGGGAGAAGGATTATGAAACTTCATGACTTGATGGAAGAAATGGAGCTTGTCATAGATAACAACAATGAGAGGAATCAAGTGTTGGAGGGGAACCTTGGCTTCTTATTGAGTTGTACACAGGAAGCTGCTGTTGATCCACCTTATGTTGCCTTTGCAGTAAGGCCAAATCCTGGAGTTTGGGAATTTGTAAGAGTGAGCTCTGAAGATCTTTCAGTTGAACCTATATCCTCCACAGATTACCTCAAATTCAAGGAAAGTGTGTATGACGAAGAATGGGCAAACGATGAAAACTCATTTGAAGCAGATTTTGGAGCATTTGATTTCCCTATTCCAAACATAACCCTGCCTTCTTCAATTGGAAATGGACTCCATTTCGTTTCAAAGTTCTTAACTTCAAGGTTTAGTGGGAAACTAACAAAAACACAACCTATAGTGGACTACTTAGTATCACTAAACCATCAAGGAGAAAGCCTGATGATCAGTGATACCCTTAGTTCTGCTGCAAAGCTTCAGCTGGCACTGATGGTGGCTGATGGACATCTCTCAGCACTTCCCAAGGATGCCCCTTATCAGGATTTTGAGCCAAAGCTCAAGGAGTGGGGTTTTGAGAGAGGATGGGGAGATACTGCAGGAAGAGTGAAGGAGACAATGGGAACTCTATCAGAAATACTACAAGCTCCAGATGCAGTGAATTTGGAGAAGTTTTTTAGCAGGGTTCCTACAATTTTCAATGTTGTGATATTCTCTATACATGGTTATTTTGGACAAGCAGATGTTCTTGGCTTGCCAGACACCGGTGGACAGGTAGTTTACATACTGGATCAAGTTAGAGCTCTTGAAGCTGAGTTGTTGCTCAGAATTAAGCAACAAGGTCTAAATGTAAAGCCTCAGATTCTTGTAGTCACAAGGCTCATCCCTGATGCTCAAGGAACCAAGTGTAATCAGGAGTTGGAACCAATCATTGATACCAAACACTCCAACATTCTACGAGTTCCTTTTCACACAGATAAAGGAATCTTGCGCCAATGGGTCTCTCGCTTTGACATTTATCCTTATCTTGAGAGGTTTACTAAGGATGCCACAGTCAAGATTCTCAACCTCATGGATGGAAAACCAGATCTTATTATTGGAAATTACACTGATGGGAATTTGGTAGCATCTCTTATGGCTAACAAACTTAGGATAACTCAGGGAACTGTTGCACATGCTTTAGAGAAGACTAAGTATGAAGATTCAGATGTCAAGTGGAAAGAATTAGATCCCAAGTATCACTTCTCTTGTCAATTCATGGCTGATACAATTGCAATGAATGCATCAGATTTCATCATAACCAGCACCTATCAGGAAATTGCAGGAAGCAAAGATAGACCAGGACAATATGAAAGTCATGCTGCATTTACACTCCCAGGGCTGTGTAGGGTTGTTTCAGGGATAAATGTATTTGATCCCAAGTTCAACATAGCTGCACCTGGAGCTGACCAGTCTGTCTATTTCCCTTACACAGACAAAGTCAAAAGACTCACTCAATTTTTTCCTGCCATTGAAGACCTGTTGTACAGTAAAGTGGATACCAATGAGCATATTGGATATCTAGAAAACAGGAGAAAACCTATAATCTTCTCAATGGCAAGGTTTGATGTTGTGAAGAACTTGACCGGTTTAGTTGAGTGGTATGGGAATAACCAAAGACTGAGAAAGATGGTGAACCTTGTCATAGTTGGAGGCTTCTTTGACCCTTTGAAATCCAAAGATAGGGAGGAAATGACAGAGATAAGAAAGATGCATGATTTGGTAGCAAAGTATCAACTCAAGGGTCAATTCAGATGGATTGCTGCACAAACTGATCGATATCGAAATGGAGAGCTATACCGCTTCATTGCTGACACAAAGGGAGCTTTTGTGCAGCCTGCTTTGTATGAAGCATTTGGTCTCACTGTCATTGAAGCTATGAACTGTGGTTTGCCTACTTTTGCTACCAACCAAGGAGGTCCAGCAGAAATCATTGTTGACGGGATCTCCGGCTTCCACATTGATCCTCACAATGGAGAAGAATCAAGCAACAAAATTGCTGATTTTTTTGAAAAATGCTTACAAGATTCAGCACATTGGAATAGAATTTCAGCAGCCGGATTGCAACGCATAAATGAATGCTATACATGGAAGATCTATGCAAACAAGATGTTGAACATGGGGAGCAGTTATACCTTCTGGAGGCGGGTGAATAATGAACAAAAAGAGGCAAAGCAAAGATACATCAAGATGTTCTACAATCTTATGTACAAGAATTTGGTGAAGACTGTACCTGTTCCAAATCATGAACCTCAACAACCACAACCAGTGGTGTCCAAGAAGCAAAGTGTCAAAAAACAAGGCACAAGCAAACGTTCACAGTCTGGATTGCAAAGCTTATTTGGAGCTTAA
Predicted protein sequences of Glyma11g33240
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g33240.1 sequence type=predicted peptide gene model=Glyma11g33240 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASSPLLTGKELVTNDMPDNAMRPSWYHVKRCFAKYIEKGRRIMKLHDLMEEMELVIDNNNERNQVLEGNLGFLLSCTQEAAVDPPYVAFAVRPNPGVWEFVRVSSEDLSVEPISSTDYLKFKESVYDEEWANDENSFEADFGAFDFPIPNITLPSSIGNGLHFVSKFLTSRFSGKLTKTQPIVDYLVSLNHQGESLMISDTLSSAAKLQLALMVADGHLSALPKDAPYQDFEPKLKEWGFERGWGDTAGRVKETMGTLSEILQAPDAVNLEKFFSRVPTIFNVVIFSIHGYFGQADVLGLPDTGGQVVYILDQVRALEAELLLRIKQQGLNVKPQILVVTRLIPDAQGTKCNQELEPIIDTKHSNILRVPFHTDKGILRQWVSRFDIYPYLERFTKDATVKILNLMDGKPDLIIGNYTDGNLVASLMANKLRITQGTVAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTIAMNASDFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTDKVKRLTQFFPAIEDLLYSKVDTNEHIGYLENRRKPIIFSMARFDVVKNLTGLVEWYGNNQRLRKMVNLVIVGGFFDPLKSKDREEMTEIRKMHDLVAKYQLKGQFRWIAAQTDRYRNGELYRFIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGISGFHIDPHNGEESSNKIADFFEKCLQDSAHWNRISAAGLQRINECYTWKIYANKMLNMGSSYTFWRRVNNEQKEAKQRYIKMFYNLMYKNLVKTVPVPNHEPQQPQPVVSKKQSVKKQGTSKRSQSGLQSLFGA*