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Report for Sequence Feature Glyma11g32610

Feature Type:gene_model
Chromosome:Gm11
Start:34325085
stop:34326111
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma11g32610
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G45010AT Annotation by Michelle Graham. TAIR10: serine carboxypeptidase-like 48 | chr3:16466328-16468845 FORWARD LENGTH=510 SoyBaseE_val: 3.00E-40ISS
GO:0006508GO-bp Annotation by Michelle Graham. GO Biological Process: proteolysis SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0004185GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type carboxypeptidase activity SoyBaseN/AISS
PTHR11802Panther SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE JGI ISS
PTHR11802:SF6Panther SERINE CARBOXYPEPTIDASE CPVL/CARBOXYPEPTIDASE Y(YEAST) JGI ISS
PF00450PFAM Serine carboxypeptidase JGI ISS
UniRef100_I1LM53UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LM53_SOYBN SoyBaseE_val: 8.00E-136ISS
UniRef100_Q41691UniRef Annotation by Michelle Graham. Most informative UniRef hit: Serine carboxypeptidase (Fragment) n=1 Tax=Vigna radiata RepID=Q41691_VIGRA SoyBaseE_val: 1.00E-59ISS

Expression Patterns of Glyma11g32610
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g32610 not represented in the dataset
Glyma11g32610 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g32610 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.11g207600 Wm82.a2.v1IGC As supplied by JGI

References for Glyma11g32610
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma11g32610
>Glyma11g32610.1   sequence type=CDS   gene model=Glyma11g32610   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTTTTCTCATTTCAGTCCCGTTAAAGAGATCCAAAACTGGATATTCGAAGCCTATTGATCCCGCGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATATATATATATATATATAAATCTAAAGGGTTTTGCTATTGGCAATGGGTTAACCAATCCTGAAATTCAGTACCATTCATATACAGACTACGCATTAGACATGGGACTACTTAAAAAGGCTGATTATGATAGCATCAACAAGTTGATCCCACCATGCAAGCAGGTCATAGAAGCTTGTGGCACTGAAGTTGAAGAAACATGTGTATCTTCATTATATGCTTGCAATCAGATATTCAATCAGATCATGACCATCGCTTACGATATAAATTACTATGACATTAGAAAGAAATGTATGGGAGATCTGTGTTATGACTTCTCTGTCATGGAGGATTTCTTAAACAACAAATTACAGTGTGATAATTTAATTATGGGTAACAAAGAGGGGAACACATGTGTTGGTTTGACATGGACCTCTTGCAAGTCTACAGTTGATGCATGGGGATAG
Predicted protein sequences of Glyma11g32610
>Glyma11g32610.1   sequence type=predicted peptide   gene model=Glyma11g32610   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAFLISVPLKRSKTGYSKPIDPALLHPGFTKETKQKKEFIYIYIYINLKGFAIGNGLTNPEIQYHSYTDYALDMGLLKKADYDSINKLIPPCKQVIEACGTEVEETCVSSLYACNQIFNQIMTIAYDINYYDIRKKCMGDLCYDFSVMEDFLNNKLQCDNLIMGNKEGNTCVGLTWTSCKSTVDAWG*






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