SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G30860 | AT | Annotation by Michelle Graham. TAIR10: RING/U-box superfamily protein | chr1:10986696-10989246 REVERSE LENGTH=730 | SoyBase | E_val: 2.00E-17 | ISS |
| GO:0008270 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: zinc ion binding | SoyBase | N/A | ISS |
| UniRef100_D7KFR5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Protein binding protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KFR5_ARALL | SoyBase | E_val: 5.00E-17 | ISS |
| UniRef100_UPI000233B326 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233B326 related cluster n=1 Tax=unknown RepID=UPI000233B326 | SoyBase | E_val: 5.00E-107 | ISS |
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Glyma11g32134 not represented in the dataset |
Glyma11g32134 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
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| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g32134.1 sequence type=CDS gene model=Glyma11g32134 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATACTCCTAGGATACGTATCCGGCCATATTCGTGGAGTATCGGTGTCGGATATGGGTGCGACACCGATACTTTTCCTTTTTTCACGTATCCGGGCTTCACAGATCATAACACAGAAGAAGCTCATCCAAGTTCAGATGTCAAGGTCCAAGAAACATGTCCAAGTTCAGATGTCAAGACTCCACACAATGACTCACAAGAAACTACCGAGGCAACTTCATCCACGAGGGGTTCAAATCTAAATGAGATAATGGCAGATAGGGCAGAGACGAGCAACCAACAAAATGCTATGGCTAAAAGCAGTAATGATGAGACATTCAATGAGGAAGTGGAAAGTTACCAGAAGTATGCCGAAACCAGTTATGAGGAGACAGTAGAAAAGGCAAGTAATCAGAACTATGCTGAGAGCAGTTATGGTGATGAGATGGAGGAAGAGGTAGAGGAAATTGAACAGAATTTCTATGAAACTAATTATGATTGGATCAGTGAAATTTCTAGGCCTAGGAGCTATTGGGAAGAGCGCAGGCAAGCATGGTATAGAGAGATGCTTGAAAATGGTTCTCAAAATGAGGATATACGAAGGCTTCTTGACAGAAGAACAGTGTCAAGTTTCCTTTCTAGTGACTTCAGGGATAGAATGGATAGATTGATGGAATCTCATAGGGGAACACAAACACATCTAGTCAGTAGTCAAGACTGTGAGGAAGATAGTGAACACACTAGTATAGATCAATGA
>Glyma11g32134.1 sequence type=predicted peptide gene model=Glyma11g32134 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDTPRIRIRPYSWSIGVGYGCDTDTFPFFTYPGFTDHNTEEAHPSSDVKVQETCPSSDVKTPHNDSQETTEATSSTRGSNLNEIMADRAETSNQQNAMAKSSNDETFNEEVESYQKYAETSYEETVEKASNQNYAESSYGDEMEEEVEEIEQNFYETNYDWISEISRPRSYWEERRQAWYREMLENGSQNEDIRRLLDRRTVSSFLSSDFRDRMDRLMESHRGTQTHLVSSQDCEEDSEHTSIDQ*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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