|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G05120 | AT | Annotation by Michelle Graham. TAIR10: Major facilitator superfamily protein | chr4:2632886-2634824 REVERSE LENGTH=418 | SoyBase | E_val: 1.00E-62 | ISS |
GO:0006810 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transport | SoyBase | N/A | ISS |
GO:0015858 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nucleoside transport | SoyBase | N/A | ISS |
GO:0015864 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pyrimidine nucleoside transport | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0005337 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleoside transmembrane transporter activity | SoyBase | N/A | ISS |
PTHR10332 | Panther | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER ENT (SLC29) | JGI | ISS | |
PTHR10332:SF3 | Panther | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4-RELATED | JGI | ISS | |
PF01733 | PFAM | Nucleoside transporter | JGI | ISS | |
UniRef100_B9H1Z9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Equilibrative nucleoside transporter n=1 Tax=Populus trichocarpa RepID=B9H1Z9_POPTR | SoyBase | E_val: 6.00E-71 | ISS |
UniRef100_I1ME90 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1ME90_SOYBN | SoyBase | E_val: 3.00E-80 | ISS |
Glyma11g30300 not represented in the dataset |
Glyma11g30300 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g30300.1 sequence type=CDS gene model=Glyma11g30300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high AACCTTGCTGTTGTTGGCATTCAAACAAAGACTGATGATCAAGGTGGATATGATAGCAAAAAAGAAGAGCAGTTGAGCAACAAACAATTATTTGTTGAGAACCATGATTATGTAGTTGGTTTATTTTATATATTTGTGGTAACACTGTCAATCTTTCCTGGATTTTTGTATGAAAATACTGGAACACATCAGTTAGGCACATGCAAACATTTTCTACTTAATTACCCAGTTGTTTTAATTGCTATGTATAATGTGGTGGATTTCATACCAATATATATTCCCCTTGTGCCATGGCTAAAGTTGGAATCAAGAAAGGGTTTACTAATAGCAGTGTTTTCTAGATTCTTGCTGATCCCAGCATTCTACTTCACAGCAAAATATGGTGACCAAGGATGGATGATTCTGCTAGCCTCCTTCTTGGGACTCACCAATGGCTATCTCACTGTTTGTGTTCTCACTGTGGCACCAAGAGGTTACAAGGCAAGCAAACAGGTTGATGCTATGGTGGAACTGTCAAAGATATGCCTTCTTCTACGAATATTTCCTCCTGAGGAGTCTTAG
>Glyma11g30300.1 sequence type=predicted peptide gene model=Glyma11g30300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high NLAVVGIQTKTDDQGGYDSKKEEQLSNKQLFVENHDYVVGLFYIFVVTLSIFPGFLYENTGTHQLGTCKHFLLNYPVVLIAMYNVVDFIPIYIPLVPWLKLESRKGLLIAVFSRFLLIPAFYFTAKYGDQGWMILLASFLGLTNGYLTVCVLTVAPRGYKASKQVDAMVELSKICLLLRIFPPEES*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||