Report for Sequence Feature Glyma11g30110
Feature Type: gene_model
Chromosome: Gm11
Start: 31010917
stop: 31013840
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g30110
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G30360 AT
Annotation by Michelle Graham. TAIR10: SOS3-interacting protein 4 | chr2:12937265-12938572 REVERSE LENGTH=435
SoyBase E_val: 9.00E-174 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0009268 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to pH
SoyBase N/A ISS
GO:0009611 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to wounding
SoyBase N/A ISS
GO:0009620 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to fungus
SoyBase N/A ISS
GO:0009695 GO-bp
Annotation by Michelle Graham. GO Biological Process: jasmonic acid biosynthetic process
SoyBase N/A ISS
GO:0009723 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus
SoyBase N/A ISS
GO:0009738 GO-bp
Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway
SoyBase N/A ISS
GO:0009753 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to jasmonic acid stimulus
SoyBase N/A ISS
GO:0010118 GO-bp
Annotation by Michelle Graham. GO Biological Process: stomatal movement
SoyBase N/A ISS
GO:0019722 GO-bp
Annotation by Michelle Graham. GO Biological Process: calcium-mediated signaling
SoyBase N/A ISS
GO:0035556 GO-bp
Annotation by Michelle Graham. GO Biological Process: intracellular signal transduction
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0042802 GO-mf
Annotation by Michelle Graham. GO Molecular Function: identical protein binding
SoyBase N/A ISS
KOG0583
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24343 Panther
SERINE/THREONINE KINASE
JGI ISS
PTHR24343:SF45 Panther
SERINE/THREONINE-PROTEIN KINASE PTK1,2/STK1,2
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF03822 PFAM
NAF domain
JGI ISS
UniRef100_B9RVE0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: CBL-interacting serine/threonine-protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RVE0_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI0001CAE45B UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0001CAE45B related cluster n=1 Tax=unknown RepID=UPI0001CAE45B
SoyBase E_val: 0 ISS
Expression Patterns of Glyma11g30110
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma11g30110
Paralog Evidence Comments
Glyma18g06130 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma11g30110 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.13g069500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g30110
Coding sequences of Glyma11g30110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g30110.2 sequence type=CDS gene model=Glyma11g30110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCCGGAGATCGGCCAGGCGGCGGTGGCTGCGGCGGCGGATGACACCGCCCTGTTCGGAAAATACGAGCTGGGCCGCATCCTCGGCTGCGGCGCCTTCGCCAAAGTCCACTACGCGCGCAACGTGCAAACGGGGCAGAGCGTGGCCGTGAAAATCATCAACAAAAAAAAACTCGCCGGAACTGGCCTCGCCGGAAACGTGAAGCGCGAAATCACGATCATGAGCAAGCTCCACCACCCCCACATCGTGCGCCTCCACGAGGTCCTCGCCACCAAGACCAAAATCTTCTTCATTATGGACTTCGTACGCGGCGGCGAGCTGTTCGGGAAAATCTCAAAGGGCCGATTCGCCGAGGATCTCAGCCGCAAATACTTTCATCAACTGATCTCCGCCGTGGGGTACTGCCACTCGCGCGGCGTATTCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGAACGGCGATTTGAGGGTCTCGGATTTCGGGTTGAGTGCGGTTCGGGATCAGATCCGACCCGATGGCTTGCTCCACACGCTTTGCGGAACCCCTGCTTACGTGGCACCAGAGATTTTAGGCAAAAAAGGTTATGATGGTGCCAAGGTTGATGTGTGGTCATGCGGCGTCGTTTTGTTCGTGCTCGCCGCAGGTTACTTACCATTCAACGACCCGAATTTGATGGTAATGTATAGGAAAATCTACAAAGGCGAGTTCCGGTGTCCGCGGTGGATGTCGCCGGAGCTCCGGCGATTCATATCGAAGTTGCTCGACACGAACCCAGAAACGAGGATCACGGTGGATGGCATGACGCGGGACCCGTGGTTCAAAAAAGGGTATAAAGAATTGAAATTTCACGAAGAGGATTACCATGCATCCGGGTCGGGTTCGTTTTTCGGGCCGAAGGATGAGAGGGTGGTGAATTTGAACGCTTTTGATTTGATATCTTTTTCTTCGGGGTTGGATTTGTCCGGGATGTTTGGGGGGGAGTGGGGGGAGAGGTTGGTGACGCGGGAGCCGCCGGAGAGGGTTTACCGGCTCACGGCGGAGCTCGCGGTGGTGGAGGTAAGGAAGAGGGGAGGCGACGCCGCGGTGAGGGGTGTGTGGGAGGAGAGGTTGAAGCCATTGTTGCTTGGTGGTGCAACCACGTCGTATAGTAATAGTAGTGAGGATGAACAACAACATCAAGAAGAAGAACAACAACATCAAGAAGAAAAACAGGAACAAGAACCTGAGTCGAAGGTTGCCTGTGAATGA
Predicted protein sequences of Glyma11g30110
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g30110.2 sequence type=predicted peptide gene model=Glyma11g30110 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MPEIGQAAVAAAADDTALFGKYELGRILGCGAFAKVHYARNVQTGQSVAVKIINKKKLAGTGLAGNVKREITIMSKLHHPHIVRLHEVLATKTKIFFIMDFVRGGELFGKISKGRFAEDLSRKYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGDLRVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILGKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYRKIYKGEFRCPRWMSPELRRFISKLLDTNPETRITVDGMTRDPWFKKGYKELKFHEEDYHASGSGSFFGPKDERVVNLNAFDLISFSSGLDLSGMFGGEWGERLVTREPPERVYRLTAELAVVEVRKRGGDAAVRGVWEERLKPLLLGGATTSYSNSSEDEQQHQEEEQQHQEEKQEQEPESKVACE*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
