Glyma11g28691 - SoyBase

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Report for Sequence Feature Glyma11g28691

Feature Type:	gene_model
Chromosome:	Gm11
Start:	29128308
stop:	29141540
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma11g28691

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF07716	PFAM	Basic region leucine zipper	JGI		ISS
UniRef100_C5XK77	UniRef	Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein Sb03g034950 n=1 Tax=Sorghum bicolor RepID=C5XK77_SORBI	SoyBase	E_val: 5.00E-06	ISS

Expression Patterns of Glyma11g28691

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g28691 not represented in the dataset	Glyma11g28691 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g28691 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.11g167900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma11g28691

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma11g28691

Limit To All Plant Sequences

>Glyma11g28691.1   sequence type=CDS   gene model=Glyma11g28691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAACCATCATACGGTGAATGCAATTTTGAGTCCTACTTTTGTCTTTTCTGCTACAAAACTAGCAGACCAATTCGGATATGCAGAAGGTAATCCTACTCCAGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTTTCTAACCGATTTGCTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCAATTTAGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACAACTACAAGATTTGTACGAAAATAAGAGGCAGACTCAGATAGTAGAAGAAGAAACAATGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCAAAGATGCTGAAATTGAGAAGGATAAAGGTGAAGTGATTAGGGAGAGGGAACTCCAAGTGATAGAGAAACAAGAGAAATTGCAAGCACATTTGGTTAACTTGAATATTGGTCCACAGGAGCCTGTGTCCAATTATCCAACCTCAATTTATTATGCAAACTCATATCCAGATCTTGTCTGGCGAGGCAATGAAAGAACAATTAACCTTGAAATAAAGGGTAAAAGCGTAACATCAAATATGAAAATTTCAACAACCCAAACAAACACCTCAATTTTGGAAGAAGTAGACAATTGGTTATCTTATAAAAATTATATCATCACTGCTGGAAGACACCGATGA

Predicted protein sequences of Glyma11g28691

Limit To All Plant Sequences

>Glyma11g28691.1   sequence type=predicted peptide   gene model=Glyma11g28691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENPKENNKVENHHTVNAILSPTFVFSATKLADQFGYAEGNPTPEQQILDPKLRRIFSNRFAAQRSREKKKNHLANLEIQKKTFENEIAQKQQLQDLYENKRQTQIVEEETMYQEIDILKNYSMFKDAEIEKDKGEVIRERELQVIEKQEKLQAHLVNLNIGPQEPVSNYPTSIYYANSYPDLVWRGNERTINLEIKGKSVTSNMKISTTQTNTSILEEVDNWLSYKNYIITAGRHR*

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