Glyma11g28671 - SoyBase

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Report for Sequence Feature Glyma11g28671

Feature Type:	gene_model
Chromosome:	Gm11
Start:	28983264
stop:	28985796
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Expression Patterns of Glyma11g28671

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g28671 not represented in the dataset	Glyma11g28671 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g28671 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.11g168000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma11g28671

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma11g28671

Limit To All Plant Sequences

>Glyma11g28671.2   sequence type=transcript   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGGCAAATGCACTTCAAATAAACTGCAGCCTCAATATTAGCGATGGTGTGGAAGATTTAGCCACCCAAATTACCCTTGATGACTCTGCATTTCACAAATATAAGAACAGCTGCTATGCTCTCCGTAACACTAAGAGAGCTAGTGCAATTACGGGTGATGGTGAAATTGGCCATGGGTGTAATAGATAATTCTCTTTATTGAGGCTACATACAAACTAAATTGTGAGTATCTGGCTCTTATATATGCCTTTTGCTTTTTCTTTTTTCACTGAAGATTAGATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAATCCTCATACGGTGAATGCAGTTTTGCATCCTACTTTTGTCTTTTCTGCTAGAAAACTAGCAGACCAATTGGGAGATACAAAAGCTGATATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAAGTGATAGAGCAACAAGAGGAATTCAAATGAAGTAGATCCACTTGAGTCATACATACCATCAGAGCCAAGCGAGATTCACACAAATCTTACAAGGGGAACTGCTCTGAACCACAAACCTTAATTAGGGCATCACTTTACATTATATTTCCCAGTTTTATGATTGCTTCAATGTGACTTGAAATTTGGATGATTGGTTTCTGTTTCTAGTGTGTTTCTATATATATAGTTGTTGTGGTTCACAGTAAACAATTATGGAGAATATGATTTCAAATGTACTGCTTTTGTTTATGTGGTGGGTTCTTAATTATTTAATGTTCTA

>Glyma11g28671.3   sequence type=transcript   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGGCAAATGCACTTCAAATAAACTGCAGCCTCAATATTAGCGATGGTGTGGAAGATTTAGCCACCCAAATTACCCTTGATGACTCTGCATTTCACAAATATAAGAACAGCTGCTATGCTCTCCGTAACACTAAGAGAGCTAGTGCAATTACGGGTGATGGTGAAATTGGCCATGGGTGTAATAGATAATTCTCTTTATTGAGGCTACATACAAACTAAATTTTTTGCATCCTACTTTTGTCTTTTCTGCTAGAAAACTAGCAGACCAATTGGGAGATACAAAAGCTGATATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAAGTGATAGAGCAACAAGAGGAATTTTGCAGCAAATGAAGTAGATCCACTTGAGTCATACATACCATCAGAGCCAAGCGAGATTCACACAAATCTTACAAGGGGAACTGCTCTGAACCACAAACCTTAATTAGGGCATCACTTTACATTATATTTCCCAGTTTTATGATTGCTTCAATGTGACTTGAAATTTGGATGATTGGTTTCTGTTTCTAGTGTGTTTCTATATATATAGTTGTTGTGGTTCACAGTAAACAATTATGGAGAATATGATTTCAAATGTACTGCTTTTGTTTATGT

>Glyma11g28671.4   sequence type=transcript   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGGCAAATGCACTTCAAATAAACTGCAGCCTCAATATTAGCGATGGTGTGGAAGATTTAGCCACCCAAATTACCCTTGATGACTCTGCATTTCACAAATATAAGAACAGCTGCTATGCTCTCCGTAACACTAAGAGAGCTAGTGCAATTACGGGTGATGGTGAAATTGGCCATGGGTGTAATAGATAATTCTCTTTATTGAGGCTACATACAAACTAAATTTTTTGCATCCTACTTTTGTCTTTTCTGCTAGAAAACTAGCAGACCAATTGGGAGATACAAAAGCTGATATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAAGTGATAGAGCAACAAGAGGAATTCAAATGAAGTAGATCCACTTGAGTCATACATACCATCAGAGCCAAGCGAGATTCACACAAATCTTACAAGGGGAACTGCTCTGAACCACAAACCTTAATTAGGGCATCACTTTACATTATATTTCCCAGTTTTATGATTGCTTCAATGTGACTTGAAATTTGGATGATTGGTTTCTGTTTCTAGTGTGTTTCTATATATATAGTTGTTGTGGTTCACAGTAAACAATTATGGAGAATATGATTTCAAATGTACTGCTTTTGTTTATGTGGTGGGTTCTTAATTATTTAATGTTCTA

Coding sequences of Glyma11g28671

Limit To All Plant Sequences

>Glyma11g28671.1   sequence type=CDS   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAATCCTCATACGGTGAATGCAGTTTTGCATCCTACTTTTGTCTTTTCTGCTAGAAAACTAGCAGACCAATTGGGAGATACAAAAGCTGATATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAA

>Glyma11g28671.2   sequence type=CDS   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAATCCTCATACGGTGAATGCAGTTTTGCATCCTACTTTTGTCTTTTCTGCTAGAAAACTAGCAGACCAATTGGGAGATACAAAAGCTGATATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAA

>Glyma11g28671.3   sequence type=CDS   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAA

>Glyma11g28671.4   sequence type=CDS   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATCCTGATCCGGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTGTCAAACTCATTTGTTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCCATATGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACCAATACAAGATTTGTACCAAAATAAGAGGCAAGCTCAGATAGTAGAAGAAGAAACATTGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCGAAGATGCTGAAATTGAGAAGAACAAAGGTGAAGTGAATAGGGAGAGAGAACTCTAA

Predicted protein sequences of Glyma11g28671

Limit To All Plant Sequences

>Glyma11g28671.1   sequence type=predicted peptide   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENPKENNKVENPHTVNAVLHPTFVFSARKLADQLGDTKADMDPDPEQQILDPKLRRILSNSFVAQRSREKKKNHLAHMEIQKKTFENEIAQKQPIQDLYQNKRQAQIVEEETLYQEIDILKNYSMFEDAEIEKNKGEVNREREL*

>Glyma11g28671.2   sequence type=predicted peptide   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MENPKENNKVENPHTVNAVLHPTFVFSARKLADQLGDTKADMDPDPEQQILDPKLRRILSNSFVAQRSREKKKNHLAHMEIQKKTFENEIAQKQPIQDLYQNKRQAQIVEEETLYQEIDILKNYSMFEDAEIEKNKGEVNREREL*

>Glyma11g28671.3   sequence type=predicted peptide   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDPDPEQQILDPKLRRILSNSFVAQRSREKKKNHLAHMEIQKKTFENEIAQKQPIQDLYQNKRQAQIVEEETLYQEIDILKNYSMFEDAEIEKNKGEVNREREL*

>Glyma11g28671.4   sequence type=predicted peptide   gene model=Glyma11g28671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDPDPEQQILDPKLRRILSNSFVAQRSREKKKNHLAHMEIQKKTFENEIAQKQPIQDLYQNKRQAQIVEEETLYQEIDILKNYSMFEDAEIEKNKGEVNREREL*

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