Glyma11g28510 - SoyBase

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Report for Sequence Feature Glyma11g28510

Feature Type:	gene_model
Chromosome:	Gm11
Start:	28841883
stop:	28842827
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma11g28510

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_G7IE46	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Transcription factor bHLH130 n=1 Tax=Medicago truncatula RepID=G7IE46_MEDTR	SoyBase	E_val: 5.00E-17	ISS
UniRef100_I1LJT5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LJT5_SOYBN	SoyBase	E_val: 9.00E-44	ISS

Expression Patterns of Glyma11g28510

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g28510 not represented in the dataset	Glyma11g28510 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g28510 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma11g28510

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma11g28510

Limit To All Plant Sequences

>Glyma11g28510.1   sequence type=CDS   gene model=Glyma11g28510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCATCAAGGCCTGAAATTGGAAACAAGAGTAACACACAGAACAATGCAGAAAATGAAGGGTTTGCTGAAAGCCAGGGCAATGAATTTATCCCTGCAGGTTTCCCCGTTGGTCCGTGGGATGATTCTGCAATCATGTCTGACAATATGACAGGTCTGAAGAGATTTAGAGATGAAGATGTGAAACCATTTTCTGGTTTAAATGCACCTGAAAGTCAGGTAGAGTACCACTGGACCAAGGTAATATATTTGGTGTGTAATTTTGAACTGCAATGTTAG

Predicted protein sequences of Glyma11g28510

Limit To All Plant Sequences

>Glyma11g28510.1   sequence type=predicted peptide   gene model=Glyma11g28510   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSSRPEIGNKSNTQNNAENEGFAESQGNEFIPAGFPVGPWDDSAIMSDNMTGLKRFRDEDVKPFSGLNAPESQVEYHWTKVIYLVCNFELQC*

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