|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G36880 | AT | Annotation by Michelle Graham. TAIR10: methionine adenosyltransferase 3 | chr2:15479721-15480893 REVERSE LENGTH=390 | SoyBase | E_val: 3.00E-58 | ISS |
GO:0006556 | GO-bp | Annotation by Michelle Graham. GO Biological Process: S-adenosylmethionine biosynthetic process | SoyBase | N/A | ISS |
GO:0006598 | GO-bp | Annotation by Michelle Graham. GO Biological Process: polyamine catabolic process | SoyBase | N/A | ISS |
GO:0006816 | GO-bp | Annotation by Michelle Graham. GO Biological Process: calcium ion transport | SoyBase | N/A | ISS |
GO:0006970 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to osmotic stress | SoyBase | N/A | ISS |
GO:0007030 | GO-bp | Annotation by Michelle Graham. GO Biological Process: Golgi organization | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0009698 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phenylpropanoid metabolic process | SoyBase | N/A | ISS |
GO:0042398 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular modified amino acid biosynthetic process | SoyBase | N/A | ISS |
GO:0046686 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cadmium ion | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0009506 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma | SoyBase | N/A | ISS |
GO:0004478 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: methionine adenosyltransferase activity | SoyBase | N/A | ISS |
GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
PTHR11964 | Panther | S-ADENOSYLMETHIONINE SYNTHETASE | JGI | ISS | |
PF02773 | PFAM | S-adenosylmethionine synthetase, C-terminal domain | JGI | ISS | |
UniRef100_I1LZ62 | UniRef | Annotation by Michelle Graham. Best UniRef hit: S-adenosylmethionine synthase n=1 Tax=Glycine max RepID=I1LZ62_SOYBN | SoyBase | E_val: 2.00E-64 | ISS |
UniRef100_I1LZ62 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: S-adenosylmethionine synthase n=1 Tax=Glycine max RepID=I1LZ62_SOYBN | SoyBase | E_val: 2.00E-64 | ISS |
Glyma11g27680 not represented in the dataset |
Glyma11g27680 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g27680.1 sequence type=CDS gene model=Glyma11g27680 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GACCTCATGGAGATGCAGGACTCATTGGGAGGAAGATCATCATTGATACCTATGGTGGGTGGGGTGCTCATGGTGGAGGAGGTGCCTTCTCACCCAAGGAGAAGTGGGTTGGTTCAGACCCAAATAGGCCTTGCATACATTGTTAGGCAAGCAGCAAAGAGTGTGGTGGCTTCAGGGCTTGCGTGCCATTGCATTGTGCAAGTTTCCTATGTAATTGGGGTGCCTGATCCACTGTCTGTGTTTGTGGATACCTACAAAACTGGGAAGATTCCAGATAGTGATATTCTGGCTTTGATTAAGGAGCATTTTGACTTCAGGCCTGGAATGATTTCCATCAATCTTGACCTCATGAGAGGGGGAAACTTCAGGTACCAGAAGGCTGCTGCTTATGGCCATTTTGGAAGAGATGATCCTAATTTCACATGGGAGACACTGAAGATACTCAAGCCC
>Glyma11g27680.1 sequence type=predicted peptide gene model=Glyma11g27680 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high DLMEMQDSLGGRSSLIPMVGGVLMVEEVPSHPRRSGLVQTQIGLAYIVRQAAKSVVASGLACHCIVQVSYVIGVPDPLSVFVDTYKTGKIPDSDILALIKEHFDFRPGMISINLDLMRGGNFRYQKAAAYGHFGRDDPNFTWETLKILKP
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||