|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G50740 | AT | Annotation by Michelle Graham. TAIR10: Heavy metal transport/detoxification superfamily protein | chr5:20637148-20637847 REVERSE LENGTH=162 | SoyBase | E_val: 4.00E-26 | ISS |
GO:0030001 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metal ion transport | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0046872 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: metal ion binding | SoyBase | N/A | ISS |
KOG1603 | KOG | Copper chaperone | JGI | ISS | |
PTHR22814 | Panther | COPPER TRANSPORT PROTEIN ATOX1-RELATED | JGI | ISS | |
PTHR22814:SF52 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF00403 | PFAM | Heavy-metal-associated domain | JGI | ISS | |
UniRef100_B9RAC5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Metal ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RAC5_RICCO | SoyBase | E_val: 3.00E-25 | ISS |
UniRef100_I1LLI7 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1LLI7_SOYBN | SoyBase | E_val: 4.00E-68 | ISS |
Glyma11g26230 not represented in the dataset |
Glyma11g26230 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g26230.1 sequence type=CDS gene model=Glyma11g26230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAAAAGAAAGACAAAGGAAACAAAGAAGAAGCCAAAGATAAAAAGAAGAAAGAGGAGCCACCACCAGAAATAGTGCTCAAAGTTGATATGCACTGTGAGGCCTGTGCAAGGAAAGTTGCAAAAGCATTGAAAGGATTCCAAGGAGTGGAAGAGGTAAGTGCGGATAGCAGGACAAACAAAGTGGTAGTGAAAGGAAAGACAACAGACCCCATAAAGGTGTGTGAGAGGCTACAAAAGAAAAGTGGTAAGAAACTGGAGCTGATTTCACCCTTGCCTAAACCTCAGAGGAGAAAGAAGAACCACCCAAAGAAGAACCACCAAAAGTGGAGAAAAAAATATGAG
>Glyma11g26230.1 sequence type=predicted peptide gene model=Glyma11g26230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MEKKDKGNKEEAKDKKKKEEPPPEIVLKVDMHCEACARKVAKALKGFQGVEEVSADSRTNKVVVKGKTTDPIKVCERLQKKSGKKLELISPLPKPQRRKKNHPKKNHQKWRKKYE
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||