|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G32830 | AT | Annotation by Michelle Graham. TAIR10: ataurora1 | chr4:15842557-15844354 FORWARD LENGTH=294 | SoyBase | E_val: 1.00E-47 | ISS |
GO:0006342 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chromatin silencing | SoyBase | N/A | ISS |
GO:0006468 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein phosphorylation | SoyBase | N/A | ISS |
GO:0016572 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone phosphorylation | SoyBase | N/A | ISS |
GO:0022402 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell cycle process | SoyBase | N/A | ISS |
GO:0051567 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005730 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleolus | SoyBase | N/A | ISS |
GO:0005819 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: spindle | SoyBase | N/A | ISS |
GO:0005874 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: microtubule | SoyBase | N/A | ISS |
GO:0009504 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cell plate | SoyBase | N/A | ISS |
GO:0004672 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein kinase activity | SoyBase | N/A | ISS |
GO:0004674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity | SoyBase | N/A | ISS |
GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
GO:0016301 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: kinase activity | SoyBase | N/A | ISS |
GO:0016772 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups | SoyBase | N/A | ISS |
GO:0035175 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: histone kinase activity (H3-S10 specific) | SoyBase | N/A | ISS |
PTHR24350 | Panther | SERINE/THREONINE-PROTEIN KINASE IAL-RELATED | JGI | ISS | |
PF00069 | PFAM | Protein kinase domain | JGI | ISS | |
UniRef100_B9RRX5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine-protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RRX5_RICCO | SoyBase | E_val: 6.00E-46 | ISS |
UniRef100_UPI000233D2DA | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233D2DA related cluster n=1 Tax=unknown RepID=UPI000233D2DA | SoyBase | E_val: 4.00E-69 | ISS |
Glyma11g23233 not represented in the dataset |
Glyma11g23233 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.11g176700 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g23233.1 sequence type=CDS gene model=Glyma11g23233 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCCATCACAACAGAGACTCAACCTCAACCTCAACAACACAAGGTTTCGGGTTCAATTGCAGAGCAAAGAAGGTGGATGCTTAAAGATTTCAATATCGGAAAGCCTCTTGGAAGAGGAAAATTCGGTCACGTCTATTTGAGTCAATTGCAACAATCCCAAGTTGTGCATCAACTTCGACGTGAAGTTAAAATACAAAGTCATCTTCGACATCCCCATATTTTGTGCCTCTATGGATACTTTGATGACCAGTATGTTGCATCATTGGCCCGAGCTCTTATATATTGCTATGGAAAGCATGTAATACATAGGGATATTAAACCGAAGAACCTTCTTATTGGTTCACAGGTGATCTCCTATACCCAGGTGATAACTGCTAAATAA
>Glyma11g23233.1 sequence type=predicted peptide gene model=Glyma11g23233 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAITTETQPQPQQHKVSGSIAEQRRWMLKDFNIGKPLGRGKFGHVYLSQLQQSQVVHQLRREVKIQSHLRHPHILCLYGYFDDQYVASLARALIYCYGKHVIHRDIKPKNLLIGSQVISYTQVITAK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||