|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G31270 | AT | Annotation by Michelle Graham. TAIR10: homolog of yeast CDT1 A | chr2:13329037-13331544 FORWARD LENGTH=571 | SoyBase | E_val: 2.00E-22 | ISS |
GO:0006084 | GO-bp | Annotation by Michelle Graham. GO Biological Process: acetyl-CoA metabolic process | SoyBase | N/A | ISS |
GO:0006260 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA replication | SoyBase | N/A | ISS |
GO:0006261 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA-dependent DNA replication | SoyBase | N/A | ISS |
GO:0006270 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA replication initiation | SoyBase | N/A | ISS |
GO:0006275 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of DNA replication | SoyBase | N/A | ISS |
GO:0006342 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chromatin silencing | SoyBase | N/A | ISS |
GO:0009658 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chloroplast organization | SoyBase | N/A | ISS |
GO:0009909 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of flower development | SoyBase | N/A | ISS |
GO:0010389 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of G2/M transition of mitotic cell cycle | SoyBase | N/A | ISS |
GO:0016458 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gene silencing | SoyBase | N/A | ISS |
GO:0016572 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone phosphorylation | SoyBase | N/A | ISS |
GO:0034968 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone lysine methylation | SoyBase | N/A | ISS |
GO:0048229 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gametophyte development | SoyBase | N/A | ISS |
GO:0051276 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chromosome organization | SoyBase | N/A | ISS |
GO:0051567 | GO-bp | Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation | SoyBase | N/A | ISS |
GO:0051726 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell cycle | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0004693 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: cyclin-dependent protein kinase activity | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
GO:0019901 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein kinase binding | SoyBase | N/A | ISS |
GO:0070182 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA polymerase binding | SoyBase | N/A | ISS |
PF08839 | PFAM | DNA replication factor CDT1 like | JGI | ISS | |
UniRef100_G7KKA2 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Mitochondrial protein, putative n=1 Tax=Medicago truncatula RepID=G7KKA2_MEDTR | SoyBase | E_val: 8.00E-45 | ISS |
UniRef100_I1K8N2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K8N2_SOYBN | SoyBase | E_val: 9.00E-88 | ISS |
Glyma11g22656 not represented in the dataset |
Glyma11g22656 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g22656.1 sequence type=CDS gene model=Glyma11g22656 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTTGCTGATTTGTTTGGTCACATGAGTTGTTCACTCAGATTGTTGCATCTGTGTAAAAAGGCTTCAATTTTTCAAAATGTTTGCCGCCAGGTTGAAGTTCTTTCGAAGAGGAAATTCTCCCATGCCCATCTTGCGCAGATGAAGTATATACTCCCTAAAAGTGTGTGTATAGATAGGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTGCCTGATATGAAGATCACCTTGAAATTTGAGGTTGTGGAAGATTGCTCTGGCGAATCTGCTGATCTGGCTCTTCGACGATATTTTAAATCTAAGCTGATTGATTTCTTTGATATGCATCCTGAGGACATGCCTACCCAAAAGTCAACATCATCTTATAAGCCAGGAAAAAGAGTGCTTGACTTTTCCCTCATGGAGGACAATGATGGCTTGGGCATTGAAGTGGACAAGTTAGAATCTATCAGAGCTCTGCATGGATCTATTAGGTAA
>Glyma11g22656.1 sequence type=predicted peptide gene model=Glyma11g22656 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFADLFGHMSCSLRLLHLCKKASIFQNVCRQVEVLSKRKFSHAHLAQMKYILPKSVCIDRVLVHDKKSLCMVPDMKITLKFEVVEDCSGESADLALRRYFKSKLIDFFDMHPEDMPTQKSTSSYKPGKRVLDFSLMEDNDGLGIEVDKLESIRALHGSIR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||