|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G22810 | AT | Annotation by Michelle Graham. TAIR10: GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:7621568-7623367 FORWARD LENGTH=337 | SoyBase | E_val: 6.00E-170 | ISS |
GO:0006629 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid metabolic process | SoyBase | N/A | ISS |
GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
GO:0016298 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: lipase activity | SoyBase | N/A | ISS |
GO:0016788 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, acting on ester bonds | SoyBase | N/A | ISS |
PTHR22835 | Panther | ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN | JGI | ISS | |
PTHR22835:SF39 | Panther | LATERAL SIGNALING TARGET PROTEIN 2 | JGI | ISS | |
PF00657 | PFAM | GDSL-like Lipase/Acylhydrolase | JGI | ISS | |
UniRef100_B9SN62 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SN62_RICCO | SoyBase | E_val: 4.00E-180 | ISS |
UniRef100_UPI000189D55F | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000189D55F related cluster n=1 Tax=unknown RepID=UPI000189D55F | SoyBase | E_val: 0 | ISS |
Glyma11g19600 not represented in the dataset |
Glyma11g19600 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.11g190600 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g19600.2 sequence type=transcript gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTGTCCTGTTGTATACATATGGTAGTATGGTTGAAAAGTAGGAAGTTAGGATCCTGGGAAAGTTGAAGACATCGTGTGTCAATAGTCCAATTCTTGTACTTATTGGCCTCAGCTCAAGACATGCAAGTGATTTCATCTGAGAATTGAGAATGAGTAAATATTTCCTCAAGATTGAGTGATATTCAGCTAAGAAAGTTAATGCCATGTTGCCACCTAAATAATACCATCTCAACAGTAAACTTTGGTAGCATTAACCAAGCATCCTTGCCAAACCAGCTACTATACTGTATGCACCAGATTCAAAGCATAAGACTAAAGTCAGATTATCAATTCCCAAAACTGCAACCCATCTTCAGAGTCTGCTTTCTCTATTGTGTCTTTTTGCATGAACAAGAAGCTCATTGCTGAAGAGAAAAAAAAATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTATTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATACTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAATCAAACACTTCACGAGTCATACTTTGGATTTCCTACACTTGTGGTTGCTGCTGCTGTTGCATGAAGATGGCTTGTGAAAAAGACTAAGGATATTCTAGATGTTAAATCCCAAAGATCATTGTGTGGTTTTAGGTTCCGTGTTATTGAACAAAGACTTTTTCGTCTAAGGTTGATAATAAAGTGAAAATGAACGCTTATGGCATTTTAAATA >Glyma11g19600.3 sequence type=transcript gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GCCAGCCAAGAGAAAAAGGTCAAGTGAGGAAAAGACACCTAAAAGGCTCTACATTAGTGCTGTCAGAGGAGGAAGGTTGTGATCACAGTGATCAAAGTGGTGCTGCCACTTTAGTAAATAAGGCACGCAATACAAAAACGCCTCAGCTCAAGACATGCAAGTGATTTCATCTGAGAATTGAGAATGAGTAAATATTTCCTCAAGATTGAGTGATATTCAGCTAAGAAAGTTAATGCCATGTTGCCACCTAAATAATACCATCTCAACAGTAAACTTTGGTAGCATTAACCAAGCATCCTTGCCAAACCAGCTACTATACTGTATGCACCAGATTCAAAGCATAAGACTAAAGTCAGATTATCAATTCCCAAAACTGCAACCCATCTTCAGAGTCTGCTTTCTCTATTGTGTCTTTTTGCATGAACAAGAAGCTCATTGCTGAAGAGAAAAAAAAATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCTGATATCCTTGGATTTACCTCTTATCAACCAGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTATTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATACTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAATCAAACACTTCACGAGTCATACTTTGGATTTCCTACACTTGTGGTTGCTGCTGCTGTTGCATGAAGATGGCTTGTGAAAAAGACTAAGGATATTCTAGATGTTAAATCCCAAAGATCATTGTGTGGTTTTAGGTTCCGTGTTATTGAACAAAGACTTTTTCGTCTAAGGTTGATAATAAAGTGAAAATGAACGCTTATGGCATTTTAAATA
>Glyma11g19600.1 sequence type=CDS gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCTGATATCCTTGGATTTACCTCTTATCAACCAGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTATTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATACTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAA >Glyma11g19600.2 sequence type=CDS gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTATTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATACTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAA >Glyma11g19600.3 sequence type=CDS gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCTGATATCCTTGGATTTACCTCTTATCAACCAGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTATTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATACTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAA
>Glyma11g19600.1 sequence type=predicted peptide gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSSMGYSRSFLASFLLAVLLNVTNGQPLVPAIFTFGDSIVDVGNNNHQLTIVKANFPPYGRDFENHFPTGRFCNGKLATDFIADILGFTSYQPAYLNLKTKGKNLLNGANFASASSGYFELTSKLYSSIPLSKQLEYYKECQTKLVEAAGQSSASSIISDAIYLISAGTSDFVQNYYINPLLNKLYTTDQFSDTLLRCYSNFIQSLYALGARRIGVTSLPPIGCLPAVITLFGAHINECVTSLNSDAINFNEKLNTTSQNLKNMLPGLNLVVFDIYQPLYDLATKPSENGFFEARKACCGTGLIEVSILCNKKSIGTCANASEYVFWDGFHPSEAANKVLADELITSGISLIS* >Glyma11g19600.2 sequence type=predicted peptide gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSSMGYSRSFLASFLLAVLLNVTNGQPLVPAIFTFGDSIVDVGNNNHQLTIVKANFPPYGRDFENHFPTGRFCNGKLATDFIAYLNLKTKGKNLLNGANFASASSGYFELTSKLYSSIPLSKQLEYYKECQTKLVEAAGQSSASSIISDAIYLISAGTSDFVQNYYINPLLNKLYTTDQFSDTLLRCYSNFIQSLYALGARRIGVTSLPPIGCLPAVITLFGAHINECVTSLNSDAINFNEKLNTTSQNLKNMLPGLNLVVFDIYQPLYDLATKPSENGFFEARKACCGTGLIEVSILCNKKSIGTCANASEYVFWDGFHPSEAANKVLADELITSGISLIS* >Glyma11g19600.3 sequence type=predicted peptide gene model=Glyma11g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSSMGYSRSFLASFLLAVLLNVTNGQPLVPAIFTFGDSIVDVGNNNHQLTIVKANFPPYGRDFENHFPTGRFCNGKLATDFIADILGFTSYQPAYLNLKTKGKNLLNGANFASASSGYFELTSKLYSSIPLSKQLEYYKECQTKLVEAAGQSSASSIISDAIYLISAGTSDFVQNYYINPLLNKLYTTDQFSDTLLRCYSNFIQSLYALGARRIGVTSLPPIGCLPAVITLFGAHINECVTSLNSDAINFNEKLNTTSQNLKNMLPGLNLVVFDIYQPLYDLATKPSENGFFEARKACCGTGLIEVSILCNKKSIGTCANASEYVFWDGFHPSEAANKVLADELITSGISLIS*
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