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Report for Sequence Feature Glyma11g14320

Feature Type:gene_model
Chromosome:Gm11
Start:10262443
stop:10263531
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma11g14320
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G05950AT Annotation by Michelle Graham. TAIR10: maternal effect embryo arrest 60 | chr5:1788814-1789341 FORWARD LENGTH=175 SoyBaseE_val: 5.00E-54ISS
GO:0006661GO-bp Annotation by Michelle Graham. GO Biological Process: phosphatidylinositol biosynthetic process SoyBaseN/AISS
GO:0009793GO-bp Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_B9S3B5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glycosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9S3B5_RICCO SoyBaseE_val: 5.00E-39ISS
UniRef100_I1LJX4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1LJX4_SOYBN SoyBaseE_val: 2.00E-119ISS

Expression Patterns of Glyma11g14320
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g14320 not represented in the dataset
Glyma11g14320 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g14320 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.11g135000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma11g14320
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma11g14320
>Glyma11g14320.2   sequence type=CDS   gene model=Glyma11g14320   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTACCTTCCTTTGGTTTAGTTGTTTCATCATCGGATATGTCTGACGTGTCACGCCGGAAAATGACAACAACCACGAGAATTCACATAATGGCCTTAGACGGCATCGTGAACGTGAATTCACTCTTCACCTTAGCCCTCTTCCTCGGCATCACCACCACCAGCACCACCAACAACCTCATCGGCGACGACGACCCCGCATGCGCAGCCGGAACCTCCATTTCCGAAGACCTCATTGCGTTCCACGTGTACTCCTTCAGCTCCTTCCTCTTCTCGAGCCTCATCGCCTTGGCTCTCAAAAACATCATTAACTTCAGCAAGGACATCAAAGATGGTGACATCGTTCTGGACAGCAGCAACAACAACAACAACAACAACTGGGTTCATAGTGTTGCGAAAATTAACACTGTCGTTTTGAGGTTGGGAACTCTCGTTTCGGCTTTTGGGTCGGTGTTCGGATGCGGGTTTTTGGTGATGGCGCTTGTGGATTTGGTTCAGATCAAGTTGGGAACTTTGGGTTGTGGTAGTCCTCATACTTTTGCTGCCGTCGCTCCATTGCTTGTTCTTGTTCCCACTGCGCTACTTATCTATGTTGTTCTCGTCCTCTATGCATTTACTCGTTAG
Predicted protein sequences of Glyma11g14320
>Glyma11g14320.2   sequence type=predicted peptide   gene model=Glyma11g14320   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLPSFGLVVSSSDMSDVSRRKMTTTTRIHIMALDGIVNVNSLFTLALFLGITTTSTTNNLIGDDDPACAAGTSISEDLIAFHVYSFSSFLFSSLIALALKNIINFSKDIKDGDIVLDSSNNNNNNNWVHSVAKINTVVLRLGTLVSAFGSVFGCGFLVMALVDLVQIKLGTLGCGSPHTFAAVAPLLVLVPTALLIYVVLVLYAFTR*






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