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Report for Sequence Feature Glyma11g12880

Feature Type:gene_model
Chromosome:Gm11
Start:9209969
stop:9210439
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma11g12880
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
UniRef100_UPI000233C568UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233C568 related cluster n=1 Tax=unknown RepID=UPI000233C568 SoyBaseE_val: 2.00E-19ISS

Expression Patterns of Glyma11g12880
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g12880 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma11g12880
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma11g12880
>Glyma11g12880.1   sequence type=CDS   gene model=Glyma11g12880   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGGCTTTCTCCGTACAGTCACTTATCACAGTCACCATTCCCTCCTCTTTGTCATGTAGAGAAGCCACTGAGAAACCTTTTGCCTCCCATGTCAACCTTTCCCATTTCACGAGGTACCCTTGCACCTCAAGAGCCACAAAGCACAAAATCCGTTGCACCAATGCTCAAGCTTCAGGTGTTATATGTTTCTTAATTTTGAGTGTCATTGCTGTGTGTTCATTTGTATTTAAATTGATTTTGAGGTGA
Predicted protein sequences of Glyma11g12880
>Glyma11g12880.1   sequence type=predicted peptide   gene model=Glyma11g12880   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEAFSVQSLITVTIPSSLSCREATEKPFASHVNLSHFTRYPCTSRATKHKIRCTNAQASGVICFLILSVIAVCSFVFKLILR*






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