Report for Sequence Feature Glyma11g07850
Feature Type: gene_model
Chromosome: Gm11
Start: 5526662
stop: 5529977
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g07850
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G36220 AT
Annotation by Michelle Graham. TAIR10: ferulic acid 5-hydroxylase 1 | chr4:17137584-17139619 REVERSE LENGTH=520
SoyBase E_val: 0 ISS
GO:0009699 GO-bp
Annotation by Michelle Graham. GO Biological Process: phenylpropanoid biosynthetic process
SoyBase N/A ISS
GO:0009809 GO-bp
Annotation by Michelle Graham. GO Biological Process: lignin biosynthetic process
SoyBase N/A ISS
GO:0010224 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to UV-B
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005783 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum
SoyBase N/A ISS
GO:0004497 GO-mf
Annotation by Michelle Graham. GO Molecular Function: monooxygenase activity
SoyBase N/A ISS
GO:0005506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: iron ion binding
SoyBase N/A ISS
GO:0009055 GO-mf
Annotation by Michelle Graham. GO Molecular Function: electron carrier activity
SoyBase N/A ISS
GO:0016705 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
SoyBase N/A ISS
GO:0020037 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heme binding
SoyBase N/A ISS
GO:0046424 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ferulate 5-hydroxylase activity
SoyBase N/A ISS
KOG0156
KOG
Cytochrome P450 CYP2 subfamily
JGI ISS
PTHR24298 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24298:SF44 Panther
JGI ISS
PF00067 PFAM
Cytochrome P450
JGI ISS
UniRef100_G3E7M3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Coniferylaldehyde 5-hydroxylase n=1 Tax=Glycine max RepID=G3E7M3_SOYBN
SoyBase E_val: 0 ISS
UniRef100_I1LHY5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LHY5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma11g07850
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma11g07850
Paralog Evidence Comments
Glyma01g37430 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma11g07850 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.11g074100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g07850
Coding sequences of Glyma11g07850
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g07850.1 sequence type=CDS gene model=Glyma11g07850 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGATTGGCAAAGCATGATGGGCAACCTGGACCCATTCCAAAGAACAATCTTAATCCTCGTCCCACTAACACTACTCCTGCTGCTGTTACTATCTCGTACCCGTCCAAGACCGCCCTATCCACCAGGCCCTAAGGGCTTCCCAATCATAGGAAACATGTTTATGATGGACCAGCTAACCCACCGCGGTCTCGCCAACCTGGCCAAACACTACGGCGGAATCTTCCACCTTCGCATGGGCTTCCTCCACATGGTCGCCATCTCCGACCCCGATGCCGCGCGACAGGTTCTCCAAGTCCAAGACAACATCTTTTCCAACCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCCCACTACGGCCCCTTCTGGCGCCAGATGAGGAAACTCTGCGTCATGAAGCTCTTCAGCCGCAAGCGCGCCGAGTCCTGGCAGTCCGTTCGCGACGAGGTCGACTCCGCCGTCCGCGCCGTCGCCAACAGCGTCGGAAAACCCGTCAACATCGGAGAATTAGTGTTTAACCTCACCAAGAACATCATCTACCGCGCCGCGTTCGGGTCGAGTTCGCAGGAAGGTCAAGACGATTTCATTAAAATATTGCAGGAGTTCTCTAAGCTCTTTGGCGCGTTTAATATTGCGGATTTTATACCCTACCTCGGGCGCGTAGATCCACAAGGTTTGAACTCCAGACTCGCTAGGGCACGTGGCGCGCTCGATAGCTTCATTGATAAGATCATCGACGAGCACGTGCAGAAGAAGAATAATTATCAGAGCAGTGAAATTGGTGATGGTGAAACGGACATGGTGGATGAGTTGCTGGCGTTCTACGGCGAGGAGGCGAAGTTGAACAATGAATCGGACGATAATTTGCAGAACTCTATCAGACTCACTAAGGATAACATCAAGGCTATCATTATGGACGTGATGTTCGGAGGCACGGAAACGGTGGCGTCAGCAATCGAGTGGGTCATGTCGGAGCTGATGAGAAGCCCAGAAGACCAAAAGCGGGTCCAACAAGAGCTGGCGGATGTAGTGGGCCTGGACCGTCGGGTCGAAGAGTCCGATTTCGAGAAACTCACTTATCTCAAATGTGCCCTCAAAGAGACCCTCCGCCTCCACCCTCCGATACCGCTCCTCCTCCACGAGACGGCGGAGGACGCCACCGTCGGCGGCTACTTCGTCCCCAGGAAGGCGCGTGTTATGATCAACGCGTGGGCCATTGGGAGGGACAAGAATTCCTGGGAGGAACCCGAAACTTTTAAGCCCGCCCGGTTCCTTAAACCGGGCGTGCCCGATTTCAAGGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGAAGATCCTGCCCCGGAATGGTGTTGGGGCTCTACGCGCTTGAATTGGCGGTGGCTCATCTTCTTCACTGCTTCACGTGGGAATTGCCAGATGGAATGAAACCAAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCAAGGTCCACGCGACTCATTGCTGTACCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAA
Predicted protein sequences of Glyma11g07850
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g07850.1 sequence type=predicted peptide gene model=Glyma11g07850 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDWQSMMGNLDPFQRTILILVPLTLLLLLLLSRTRPRPPYPPGPKGFPIIGNMFMMDQLTHRGLANLAKHYGGIFHLRMGFLHMVAISDPDAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDSAVRAVANSVGKPVNIGELVFNLTKNIIYRAAFGSSSQEGQDDFIKILQEFSKLFGAFNIADFIPYLGRVDPQGLNSRLARARGALDSFIDKIIDEHVQKKNNYQSSEIGDGETDMVDELLAFYGEEAKLNNESDDNLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWVMSELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTYLKCALKETLRLHPPIPLLLHETAEDATVGGYFVPRKARVMINAWAIGRDKNSWEEPETFKPARFLKPGVPDFKGSNFEFIPFGSGRRSCPGMVLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRSTRLIAVPTKRVVCPLF*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
