Report for Sequence Feature Glyma11g07370
Feature Type: gene_model
Chromosome: Gm11
Start: 5169974
stop: 5172054
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g07370
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G36600 AT
Annotation by Michelle Graham. TAIR10: Late embryogenesis abundant (LEA) protein | chr4:17263666-17264968 FORWARD LENGTH=353
SoyBase E_val: 2.00E-20 ISS
GO:0009793 GO-bp
Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy
SoyBase N/A ISS
GO:0048445 GO-bp
Annotation by Michelle Graham. GO Biological Process: carpel morphogenesis
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_C6T960 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6T960_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q8L5P5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: LEA-like protein n=1 Tax=Lilium longiflorum RepID=Q8L5P5_LILLO
SoyBase E_val: 6.00E-18 ISS
Expression Patterns of Glyma11g07370
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma11g07370
Paralog Evidence Comments
Glyma01g37980 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma11g07370 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.11g068900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g07370
Coding sequences of Glyma11g07370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g07370.2 sequence type=CDS gene model=Glyma11g07370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CCTTTCCATTCTCTTCTCGTATCACACGATCCATCTACACGGTCAAAAAGAAAATCGTTTTCCTTGAGAAAATACGGACACAGAGACAGAGAGAGGGAGAGAGAGAAGGAAATGGGAAGCACAAAGTTTCTATTGTTGGTGATGGTGTTTCTCGCAGTGTGCGTGGGGACATGCAGGCCTTGGGGTGATGATGTAGTTGAAGATGGAGAGGAGGCCAAACATTTTGCAGCAAAAGCCGTGCATGATGTCGAGGAAGAGACCCGCTCTTGGGCTGATTGGGCTCAAGACAAGTTCTCCAAAAGTTTCGGGGCCGAAGAGGATCATGAAAAACAAGCGACTCAAAACATGAAGTATCAAGCTGAAGATGCTGCTTCAAGGGCCACGGAGAGAGTGAAATCTGCAGCATCAGGAGCCTCGGACTATGCTTCTCAAAAGGCTACGGATGCTAAGGAAGCAGTTTCAGGTGCTAAGGTCATCAAAATGCCAACAGATAGCATTAACAATGCAAAACACACAATGGGAGATACCTACGAGGATGCTAAGCAAAAAATGAACACAGCTTCAGATAAGGCTTCAAGTATGGCTCACAATGCCAAAGATAACACGGCTGAGTCCATGGAATATGGAAAAGATATAGCAGCCAATGCCTATGACCAGGGTAAGCAAAAAATAAACATTGCTTCAGATACAGCATCAGAGAAATTCTATGATGCCAAGGACAAGGCAAGTGATGTTAGGCATAAAGTGAAAGGAGCCATGGGTTGTGGAGGAGATAAGGCCAATAATGATGCTAAAAATAACATGGGCGTGAAAATGGAACATGGAAGGGACAAAGTAGCCGAAACTTTTGACCAGGCTAAACGTGAAGTGGGTGAAGCATATGTATCAGCAAAGAATACCATGACTGAAGAGGCCAAAGCTAAGTACGAGGCTGCAAAGGAGAAGGCTTCGGATGCAACAGGTGATTTAGGAGCTAAGATGAGGAACACCCCAAACGTATAA
Predicted protein sequences of Glyma11g07370
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g07370.2 sequence type=predicted peptide gene model=Glyma11g07370 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
PFHSLLVSHDPSTRSKRKSFSLRKYGHRDREREREKEMGSTKFLLLVMVFLAVCVGTCRPWGDDVVEDGEEAKHFAAKAVHDVEEETRSWADWAQDKFSKSFGAEEDHEKQATQNMKYQAEDAASRATERVKSAASGASDYASQKATDAKEAVSGAKVIKMPTDSINNAKHTMGDTYEDAKQKMNTASDKASSMAHNAKDNTAESMEYGKDIAANAYDQGKQKINIASDTASEKFYDAKDKASDVRHKVKGAMGCGGDKANNDAKNNMGVKMEHGRDKVAETFDQAKREVGEAYVSAKNTMTEEAKAKYEAAKEKASDATGDLGAKMRNTPNV*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
