Glyma11g05680 - SoyBase

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Report for Sequence Feature Glyma11g05680

Feature Type:	gene_model
Chromosome:	Gm11
Start:	3999498
stop:	4002129
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma11g05680

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G15480	AT	Annotation by Michelle Graham. TAIR10: UDP-glucosyl transferase 73B5 \| chr2:6758817-6763398 FORWARD LENGTH=494	SoyBase	E_val: 7.00E-118	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0009723	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus	SoyBase	N/A	ISS
GO:0010583	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone	SoyBase	N/A	ISS
GO:0051707	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to other organism	SoyBase	N/A	ISS
GO:0008194	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
GO:0035251	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glucosyltransferase activity	SoyBase	N/A	ISS
GO:0080043	GO-mf	Annotation by Michelle Graham. GO Molecular Function: quercetin 3-O-glucosyltransferase activity	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF15	Panther	UDP-GLUCURONOSYLTRANSFERASE RELATED	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_D4Q9Z4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Soyasapogenol B glucuronide galactosyltransferase n=2 Tax=Glycine max RepID=SGT2_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_UPI000233D720	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233D720 related cluster n=1 Tax=unknown RepID=UPI000233D720	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma11g05680

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g05680 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.11g053400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma11g05680

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma11g05680

Limit To All Plant Sequences

>Glyma11g05680.2   sequence type=CDS   gene model=Glyma11g05680   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAAGAAGAAGGGTGAGCTAAAGTCAATTTTCCTTCCTTTCCTTTCCACTAGTCACATAATCCCGCTAGTGGACATGGCCAGACTCTTCGCCTTGCACGACGTCGACGTCACCATCATCACCACCGCACATAACGCCACCGTTTTCCAAAAGTCCATCGATTTAGATGCGAGTCGCGGTCGCCCCATCAGAACGCACGTTGTCAACTTCCCCGCCGCACAAGTGGGTCTCCCCGTTGGGATCGAAGCCTTCAACGTCGATACGCCTCGGGAAATGACCCCCAGAATCTACATGGGCCTATCCCTTCTCCAACAAGTCTTCGAAAAACTCTTCCATGACTTGCAACCGGATTTCATCGTCACCGACATGTTCCACCCTTGGAGTGTCGATGCTGCTGCTAAACTCGGCATTCCGAGGATCATGTTCCACGGCGCAAGTTATCTCGCTCGCTCCGCTGCGCACTCCGTTGAACAGTACGCACCCCACTTGGAAGCAAAATTCGACACCGACAAGTTCGTGTTACCTGGGTTACCCGATAACTTGGAGATGACGCGCTTGCAGTTGCCGGATTGGCTTAGGTCTCCGAATCAGTACACTGAACTGATGAGGACGATTAAGCAGTCAGAGAAAAAGAGTTACGGTTCACTTTTTAATAGTTTTTATGACCTCGAGAGTGCTTACTACGAGCATTACAAGAGCATCATGGGAACTAAGAGTTGGGGAATTGGACCGGTTTCGTTGTGGGCGAACCAGGATGCTCAAGATAAAGCTGCACGAGGGTATGCTAAAGAAGAAGAAGAGAAAGAAGGGTGGCTTAAGTGGCTCAACTCCAAAGCAGAGAGCTCTGTTTTGTATGTGAGTTTTGGGAGCATGAACAAGTTCCCTTACTCTCAGCTCGTTGAAATAGCACGTGCGCTTGAAGATTCGGGGCATGATTTTATCTGGGTGGTGAGGAAAAACGATGGGGGTGAAGGAGATAACTTTTTGGAGGAGTTTGAGAAGAGAATGAAGGAAAGTAACAAAGGATATTTAATATGGGGTTGGGCCCCACAGTTGTTGATACTGGAGAATCCTGCGATTGGAGGGTTGGTTACTCACTGTGGTTGGAACACGGTGGTGGAAAGCGTGAACGCGGGGTTGCCGATGGCGACGTGGCCTCTGTTTGCGGAGCATTTTTTCAACGAGAAGCTGGTGGTGGATGTGTTGAAGATTGGGGTGCCGGTGGGGGCGAAAGAGTGGAGGAACTGGAACGAGTTTGGGAGTGAGGTGGTGAAACGGGAGGAGATTGGAAACGCGATTGCTTCGTTGATGAGTGAGGAAGAAGAAGATGGAGGAATGAGGAAGAGAGCCAAGGAGCTAAGCGTTGCGGCGAAGAGTGCTATAAAGGTTGGTGGATCTTCGCACAACAACATGAAGGAATTGATTCGGGAGCTCAAGGAGATCAAGCTTTCCAAGGAGGCTCAAGAGACCGCACCCAATCCTTAA

Predicted protein sequences of Glyma11g05680

Limit To All Plant Sequences

>Glyma11g05680.2   sequence type=predicted peptide   gene model=Glyma11g05680   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEKKKGELKSIFLPFLSTSHIIPLVDMARLFALHDVDVTIITTAHNATVFQKSIDLDASRGRPIRTHVVNFPAAQVGLPVGIEAFNVDTPREMTPRIYMGLSLLQQVFEKLFHDLQPDFIVTDMFHPWSVDAAAKLGIPRIMFHGASYLARSAAHSVEQYAPHLEAKFDTDKFVLPGLPDNLEMTRLQLPDWLRSPNQYTELMRTIKQSEKKSYGSLFNSFYDLESAYYEHYKSIMGTKSWGIGPVSLWANQDAQDKAARGYAKEEEEKEGWLKWLNSKAESSVLYVSFGSMNKFPYSQLVEIARALEDSGHDFIWVVRKNDGGEGDNFLEEFEKRMKESNKGYLIWGWAPQLLILENPAIGGLVTHCGWNTVVESVNAGLPMATWPLFAEHFFNEKLVVDVLKIGVPVGAKEWRNWNEFGSEVVKREEIGNAIASLMSEEEEDGGMRKRAKELSVAAKSAIKVGGSSHNNMKELIRELKEIKLSKEAQETAPNP*

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