Report for Sequence Feature Glyma11g03940
Feature Type: gene_model
Chromosome: Gm11
Start: 2634049
stop: 2636457
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g03940
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G60900 AT
Annotation by Michelle Graham. TAIR10: receptor-like protein kinase 1 | chr5:24498467-24501494 REVERSE LENGTH=748
SoyBase E_val: 0 ISS
GO:0000165 GO-bp
Annotation by Michelle Graham. GO Biological Process: MAPK cascade
SoyBase N/A ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006612 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane
SoyBase N/A ISS
GO:0009617 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to bacterium
SoyBase N/A ISS
GO:0009862 GO-bp
Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance, salicylic acid mediated signaling pathway
SoyBase N/A ISS
GO:0009867 GO-bp
Annotation by Michelle Graham. GO Biological Process: jasmonic acid mediated signaling pathway
SoyBase N/A ISS
GO:0010310 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of hydrogen peroxide metabolic process
SoyBase N/A ISS
GO:0010363 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response
SoyBase N/A ISS
GO:0031348 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of defense response
SoyBase N/A ISS
GO:0035304 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of protein dephosphorylation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0004713 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
GO:0030246 GO-mf
Annotation by Michelle Graham. GO Molecular Function: carbohydrate binding
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF846 Panther
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF01453 PFAM
D-mannose binding lectin
JGI ISS
UniRef100_G7JXG0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kinase-like protein n=1 Tax=Medicago truncatula RepID=G7JXG0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1LGT5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1LGT5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma11g03940
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma11g03940 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.11g036700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g03940
Coding sequences of Glyma11g03940
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g03940.1 sequence type=CDS gene model=Glyma11g03940 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCCCCCACCCTTTTTTTCATCTTTTCCCTTGTCTTTCTTCATGTTATGTTTGTTCTTGGAAACATTACTTTGAGTTCCACACTCTCCACCAACGACAATGATGCATGGCTTTCGCCTTCGGGTGAATTTGCTTTTGGATTTCGCCAACTTAATTCCACAAACCTGTTCGTGGTTGCCATCTGGTATGACAAAATACCAGCCAAGACCATTGTGTGGAATGCAAAAGCAAATGAAACCCTTGCAACAGCACCAGCAGGATCACAGGTTCAGCTCACATTAGAAGGGCTCACGCTGACAAGTCCGAAAGGAGAATCCATATGGAAAGCACAACCAAGCGTTCCTCTTTCCTACGGAGCTATGCTTGACACTGGCAACTTTGTTCTTGTAAACAAGAATTCTACTTTTGAATGGGAAAGTTTCAAAAACCCCACAGACACCTTGTTGCCTAACCAATTTTTGGAGCTAGATGGCAAGTTAACTTCTAGACTCCAAGATACTAACTACACGACTGGAAGGTTCCAACTATACTTTCAGAACGGTGTTCTCTTGCTAAGTCCACTTGCCTGGCCTACCCAACTACGTTATAGATATTATTATCGAATTGATGCTTCTCACTCTGCTTCACGATTAGTGTTTGATGAATTGGGGAATATTTATGTGGAGAGAGTCAATGGGACAAGAATCCGACCTCAAGGACCAACATGGGGCAACTCAAGTCTTGATCCTAAGGAGTATTACTACAGGGCAACACTTGAATTCAATGGAGTTTTCACACAGTATGCTCATCCAAGAACCAATAATGCCTACCAAGGGTGGACAATTATGCGGTATGTTCCTGGCAACATTTGCACTGCAATATTCAATGAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATGATAGGCCTACTTGCAAATGCCCTTATGGCTATTCAATGGTGGATCCAAGTAATGAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGTGGATGTTAAAGCACAACCAGAAGAACTATATGAAATGCATGAATTCAGAGATTTTAATTTCCCTCTGGGAGATTATGAAAAGAAACAACCTTATTCTCAACAGGAGTGCCGACAATCATGCTTGCACGATTGCATATGTGCAATGGCCGTTTTAGGCGGTAACACTTGTTGGATGAAGAGATTGCCCCTTTCTAATGGAAGAGTAATCCATGTTAATGATCAACATTTTGTCTATATCAAAACAAGAGTTAGGCGTGACTTTTATGATCCTGGTGCAAACGAGGAACTTCCCCCTGGTGCCGATTCAAAGAAAGAAGATGGAGCTAAGCCAATTCTTTTGGGATCACTTATTGGATCCCTTGTCTTTATCAGTATTAGTATGCTCTTGTGTGCGGTTTCTTGGTTTATTCTCTTGAAGCCGAAACTAACAAGGCTTGTCCCAGCTATTCCTAGTCTTCTGGAAACAAATTTGCATTCCTTTACCTATGAAACATTGGAAAAAGCCACACGGGGTTTCTGTGAGGAAATAGGCAGGGGTTCTTTTGGCATTGTTTACAAAGGCCAACTAGAAGCAGCTTCTTGTAACGTGATTGCCGTCAAGAGATTGGACAGATTAGCACAAGAACGAGAGAAAGAATTTAGGGCAGAATTGAGTGCCATTGGTAAAACCTGCCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGACGAGGGAATCAATAGACTATTGGTCTACGAGTTCATGAGCAATGGTACTCTTGCAGACATCCTATTTGGACAATCCAAAGCACCCATCTGGAATACAAGGGTTGGACTTGCTTTGGGGATTGCAAGAGGATTGTTGTACTTACACGAAGAGTGTGACTCTGCCATCATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAGCATTTCAATGCAAAGATCTCTGACTTTGGGTTGGCCAAGTTGTTGTTGTTTGACCAAACTAGAACAAATACGATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAACATTGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTGATGTTGTTGGAAATTATCTGTTGCCGAAGAAATGTGTTGACCATGGAAGCTGAAGAAGAAGAGAAGGTAATTCTGACAGATTGGGCTTATGATTGCTATATAGAAGGGAGAAATATAGATGCTCTGGTAGAGAATGATGAGGAGGCATTGTCTGATAATGGCAGATTGGAAAAATGGATCAAAATAGCATTTTGGTGCATTAATGAGAATCCTGAAGTGAGGCCAACAATGGGAATGGTAATGCTAATGCTAGAAGGCTTTGTTGAAGTCCCTAACCCACCACCGCCTTTTTCCATGCATTCTATATCTTAA
Predicted protein sequences of Glyma11g03940
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g03940.1 sequence type=predicted peptide gene model=Glyma11g03940 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASPTLFFIFSLVFLHVMFVLGNITLSSTLSTNDNDAWLSPSGEFAFGFRQLNSTNLFVVAIWYDKIPAKTIVWNAKANETLATAPAGSQVQLTLEGLTLTSPKGESIWKAQPSVPLSYGAMLDTGNFVLVNKNSTFEWESFKNPTDTLLPNQFLELDGKLTSRLQDTNYTTGRFQLYFQNGVLLLSPLAWPTQLRYRYYYRIDASHSASRLVFDELGNIYVERVNGTRIRPQGPTWGNSSLDPKEYYYRATLEFNGVFTQYAHPRTNNAYQGWTIMRYVPGNICTAIFNEYGSGSCGYNSYCSMENDRPTCKCPYGYSMVDPSNEFGGCQPNFTLACGVDVKAQPEELYEMHEFRDFNFPLGDYEKKQPYSQQECRQSCLHDCICAMAVLGGNTCWMKRLPLSNGRVIHVNDQHFVYIKTRVRRDFYDPGANEELPPGADSKKEDGAKPILLGSLIGSLVFISISMLLCAVSWFILLKPKLTRLVPAIPSLLETNLHSFTYETLEKATRGFCEEIGRGSFGIVYKGQLEAASCNVIAVKRLDRLAQEREKEFRAELSAIGKTCHKNLVRLIGFCDEGINRLLVYEFMSNGTLADILFGQSKAPIWNTRVGLALGIARGLLYLHEECDSAIIHCDIKPQNILIDEHFNAKISDFGLAKLLLFDQTRTNTMIRGTRGYVAPEWFKNIAVTVKVDVYSFGVMLLEIICCRRNVLTMEAEEEEKVILTDWAYDCYIEGRNIDALVENDEEALSDNGRLEKWIKIAFWCINENPEVRPTMGMVMLMLEGFVEVPNPPPPFSMHSIS*