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Report for Sequence Feature Glyma11g03660

Feature Type:gene_model
Chromosome:Gm11
Start:2458991
stop:2459613
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma11g03660
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G15733AT Annotation by Michelle Graham. TAIR10: SCR-like 11 | chr4:8961720-8962119 FORWARD LENGTH=86 SoyBaseE_val: 1.00E-11ISS
GO:0007165GO-bp Annotation by Michelle Graham. GO Biological Process: signal transduction SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
PF06876PFAM Plant self-incompatibility response (SCRL) protein JGI ISS
UniRef100_B9SXK1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Protein SCRL10, putative n=1 Tax=Ricinus communis RepID=B9SXK1_RICCO SoyBaseE_val: 2.00E-08ISS
UniRef100_I1LGR2UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LGR2_SOYBN SoyBaseE_val: 2.00E-54ISS

Expression Patterns of Glyma11g03660
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma11g03660 not represented in the dataset
Glyma11g03660 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma11g03660 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.11g033700 Wm82.a2.v1IGC As supplied by JGI

References for Glyma11g03660
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma11g03660
>Glyma11g03660.1   sequence type=CDS   gene model=Glyma11g03660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGCTACGAAGCATTCTCCTTTCTGTGTGCGTTTTGTTTGCTATCTTCAGCCACACTTATGGGGAAATCAGTTTTTGCCCCAAAAAGATGACACTGGATGGCCTATGTCCACTTGGGAGTTTAGGACAAACCTGCTTTCATGAATTCCTTGCACGACTGGGAGCAAGTGCCATGCCTATGAACTGCACTTGTAAAGATCATCATTTCAAGAATAAGCGCACATGCACTTGTGATGTTGTTTGTGACGCGTGA
Predicted protein sequences of Glyma11g03660
>Glyma11g03660.1   sequence type=predicted peptide   gene model=Glyma11g03660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKLRSILLSVCVLFAIFSHTYGEISFCPKKMTLDGLCPLGSLGQTCFHEFLARLGASAMPMNCTCKDHHFKNKRTCTCDVVCDA*






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