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Report for Sequence Feature Glyma11g03641
Feature Type: gene_model
Chromosome: Gm11
Start: 2436276
stop: 2441908
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g03641
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G16650 AT
Annotation by Michelle Graham. TAIR10: O-fucosyltransferase family protein | chr4:9372727-9375910 FORWARD LENGTH=549
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005768 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endosome
SoyBase N/A ISS
GO:0005794 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus
SoyBase N/A ISS
GO:0005802 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network
SoyBase N/A ISS
GO:0016757 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups
SoyBase N/A ISS
PF10250 PFAM
GDP-fucose protein O-fucosyltransferase
JGI ISS
UniRef100_G7JIV4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: DUF246 domain-containing protein n=1 Tax=Medicago truncatula RepID=G7JIV4_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233CB61 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233CB61 related cluster n=1 Tax=unknown RepID=UPI000233CB61
SoyBase E_val: 0 ISS
Expression Patterns of Glyma11g03641
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma11g03641
Paralog Evidence Comments
Glyma01g41740 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma11g03641 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.11g033500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g03641
Transcripts of Glyma11g03641
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g03641.2 sequence type=transcript gene model=Glyma11g03641 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CACATTCCTAGGTAGTCTGCGGTTGATTCTGCTTTTCAGTTTTTCAGATTCAGGGCTTGTTTCAACCGGGACAAATATCGTTTCCAGCAACACTGATCCATCCTCCTGCACGAATCACGTTATAATTATTCCCTTCTTCTCCTTTTGCTTCCACACCGTTCGAAAATTAAGTAATAAAACTAATTCGCCACAGTTTGGTTTGTTTCGTGAATGGGATCAGATCTGTAGGCCCACGTTTTTCATTTTCATTTTTAAAAGAGAGAGAGAGAGAGCAGTGTGATTTTCTTTCTTTCCTTTTGAGGAAACGACAATTCTGTGTTGCCTCCATATCCGTGCTTACTCACTAAACTGTTCTTCAACCATAAAGACCCTACTAATTTAGGGTTCCTATACTTGTTTTTGTGTTGGGGAGAGGATGTGAGGGTTTGTTTCTTGTAAGGTAAAAACAATGGGTGTGGGTGTGGGTTTGGAGAAGTTGAGCTTATTATCGACGACGAACCTGGCCGTGTTAGCTCAAGCGAACAACAAATGCAGCAGCAGCAGGAAGCACGTGTGTTGGAGATCATCCACCACGACCACGACGCCGTTTCAGCAGCAGCGGAAGCCGATCTCTTGGTCTGTGATGTGCGGCTTCATGCTATTTGGGCTGGGCCTCATTTCGCTCTTGACTGGCCACATGGCCTCTGATCTCGAATGGTACTCTCACCGTCGCTCTCTCTACTCTACAATGGATGGGAGCTATCGTGCGCCAATCGATGTTTGGAAATCCCAGTATTCTAAATATTACTACGGATGCGCTGAAAGGGGACGCGGTTATGCTCCTGCTGTGCCTGAGAGGATGTCAAATGGCTACTTGCTTATTGGTACTAGTGGAGGATTGAACCAACAAAGAACTGGGATAACAGATGCTGTTGTTGTTGCCCGAATTCTTAATGCCACACTAGTAGTACCGGAGTTGGATCATCATTCTTATTGGAAGGATGACAGTGACTTCATCCATATTTTCGATGTTGATTGGTTCATTTCTTATCTCGCAAAAGATGTTACTATTGTTAAAAGAGTTCCTGATAAGTTCATGCGGTCAATGGAGAAACCACCATATACAATGCGTGTCCCAAGGAAATCAGAGCCTGATTATTATCTTGATCAAGTTTTGCCTATACTTTTGAGACGACAGGTTGTTCAATTGACAAAATTTGACTACAGACTTGCAAATAACCTTGATGATGAGCTACAAAAACTACGTTGCCGCGTTAATTTTCATGCTTTGAGATTTACAAAACCTATACAAGAACTTGGTCAAAGAATTGTTATGAGAATGCAAAAGATGGCACCGCGTTTCATAGCAGTCCATTTGAGGTTTGAACCAGATATGCTAGCATTTTCAGGTTGTTATTTTGGTGGGGGAGAAAAAGAGAGACGTGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTACCTGATTTGAGCCCAGATGGAGAACGGAAGCGAGGGAAATGTCCTCTTAGTCCTCATGAAGTGGGTTTGATGCTGCGGGCACTTGGCTTTTCAAATGACACATACCTCTATGTTGCGTCAGGAGAAGTATATGGAGGGGAAGAAACTATGCAGCCTCTCAGAGATCTTTTTCCCAACATCTATACAAAGGAGATGCTAGCTGAGGAAGAGCTGAAACCTTTCCTTCCATTCTCTTCCCGCCTTGCTGCTATTGACTACATTGTTTGTGATGAAAGTGATGTATTTGTTACTAACAACAATGGTAACATGGCAAAGATTCTCGCAGGTCGAAGGAGATATATGGGTCACAAAAGAACAATCAGACCAAATGCAAAGAAGCTTAGCACGCTATTGGCGGGAAGGCATCAAATGGACTGGGATACCTTTGCCAAAAAGGTTAAGTCATGCCAGAGAGGATTCATGGGAGAGCCAGATGAGATGAGACCTGGACGAGGTGAATTTCATGAATTTCCAAGCTCTTGCGTGTGCAGGAGACCATATGTGGATGAAGAACTCAGCAAAGAGGTATACCGTTCCCCTAAACTCGTTGCAATTAACCTTACTGCAAAAGCTTATTCCTCGTCGAATGGAATTAGAAGAGGCAGGACATGATGCAGTAGTTACCTTGAACCATGGAGGTTATATCTAGCGGGGCGAAAGAAAATCAGTGTTGTCTCTCGCTCTGTTAATGCCAACTGAACGTCAATTGAAAATTGAATGCTATGGCAATGCGTCCATTTTCACACAATTGATCTCTGTAAATCATCAGGGGAGGGGTTCTTAGGTGGGTGGCTCAGTTTAGGACCTAAGGACGTCAATGCGTTGCAAAGTGTAGATATATATAATATAATATTATAATATATGCTTAGCTTAGATTGCTTTCAATCTTTTTTCGCCACAATGTCATACAAATTTGAGTTAGACATTTTCTCCTATTCTATCAGCTTAATCTATTTTTGTCAACTAATTAATTCAGATAT
Coding sequences of Glyma11g03641
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g03641.1 sequence type=CDS gene model=Glyma11g03641 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTGTGGGTGTGGGTTTGGAGAAGTTGAGCTTATTATCGACGACGAACCTGGCCGTGTTAGCTCAAGCGAACAACAAATGCAGCAGCAGCAGGAAGCACGTGTGTTGGAGATCATCCACCACGACCACGACGCCGTTTCAGCAGCAGCGGAAGCCGATCTCTTGGTCTGTGATGTGCGGCTTCATGCTATTTGGGCTGGGCCTCATTTCGCTCTTGACTGGCCACATGGCCTCTGATCTCGAATGGTACTCTCACCGTCGCTCTCTCTACTCTACAATGGATGGGAGCTATCGTGCGCCAATCGATGTTTGGAAATCCCAGTATTCTAAATATTACTACGGATGCGCTGAAAGGGGACGCGGTTATGCTCCTGCTGTGCCTGAGAGGATGTCAAATGGCTACTTGCTTATTGGTACTAGTGGAGGATTGAACCAACAAAGAACTGGGATAACAGATGCTGTTGTTGTTGCCCGAATTCTTAATGCCACACTAGTAGTACCGGAGTTGGATCATCATTCTTATTGGAAGGATGACAGTGACTTCATCCATATTTTCGATGTTGATTGGTTCATTTCTTATCTCGCAAAAGATGTTACTATTGTTAAAAGAGTTCCTGATAAGTTCATGCGGTCAATGGAGAAACCACCATATACAATGCGTGTCCCAAGGAAATCAGAGCCTGATTATTATCTTGATCAAGTTTTGCCTATACTTTTGAGACGACAGGTTGTTCAATTGACAAAATTTGACTACAGACTTGCAAATAACCTTGATGATGAGCTACAAAAACTACGTTGCCGCGTTAATTTTCATGCTTTGAGATTTACAAAACCTATACAAGAACTTGGTCAAAGAATTGTTATGAGAATGCAAAAGATGGCACCGCGTTTCATAGCAGTCCATTTGAGGTTTGAACCAGATATGCTAGCATTTTCAGGTTGTTATTTTGGTGGGGGAGAAAAAGAGAGACGTGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTACCTGATTTGAGCCCAGATGGAGAACGGAAGCGAGGGAAATGTCCTCTTAGTCCTCATGAAGTGGGTTTGATGCTGCGGGCACTTGGCTTTTCAAATGACACATACCTCTATGTTGCGTCAGGAGAAGTATATGGAGGGGAAGAAACTATGCAGCCTCTCAGAGATCTTTTTCCCAACATCTATACAAAGGAGATGCTAGCTGAGGAAGAGCTGAAACCTTTCCTTCCATTCTCTTCCCGCCTTGCTGCTATTGACTACATTGTTTGTGATGAAAGTGATGTATTTGTTACTAACAACAATGGTAACATGGCAAAGATTCTCGCAGGTCGAAGGAGATATATGGGTCACAAAAGAACAATCAGACCAAATGCAAAGAAGCTTAGCACGCTATTGGCGGGAAGGCATCAAATGGACTGGGATACCTTTGCCAAAAAGGTTAAGTCATGCCAGAGAGGATTCATGGGAGAGCCAGATGAGATGAGACCTGGACGAGGTGAATTTCATGAATTTCCAAGCTCTTGCGTGTGCAGGAGACCATATGTGGATGAAGAACTCAGCAAAGAGGTATACCGTTCCCCTAAACTCGTTGCAATTAACCTTACTGCAAAAGCTTATTCCTCGTCGAATGGAATTAGAAGAGGCAGGACATGA
>Glyma11g03641.2 sequence type=CDS gene model=Glyma11g03641 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTGTGGGTGTGGGTTTGGAGAAGTTGAGCTTATTATCGACGACGAACCTGGCCGTGTTAGCTCAAGCGAACAACAAATGCAGCAGCAGCAGGAAGCACGTGTGTTGGAGATCATCCACCACGACCACGACGCCGTTTCAGCAGCAGCGGAAGCCGATCTCTTGGTCTGTGATGTGCGGCTTCATGCTATTTGGGCTGGGCCTCATTTCGCTCTTGACTGGCCACATGGCCTCTGATCTCGAATGGTACTCTCACCGTCGCTCTCTCTACTCTACAATGGATGGGAGCTATCGTGCGCCAATCGATGTTTGGAAATCCCAGTATTCTAAATATTACTACGGATGCGCTGAAAGGGGACGCGGTTATGCTCCTGCTGTGCCTGAGAGGATGTCAAATGGCTACTTGCTTATTGGTACTAGTGGAGGATTGAACCAACAAAGAACTGGGATAACAGATGCTGTTGTTGTTGCCCGAATTCTTAATGCCACACTAGTAGTACCGGAGTTGGATCATCATTCTTATTGGAAGGATGACAGTGACTTCATCCATATTTTCGATGTTGATTGGTTCATTTCTTATCTCGCAAAAGATGTTACTATTGTTAAAAGAGTTCCTGATAAGTTCATGCGGTCAATGGAGAAACCACCATATACAATGCGTGTCCCAAGGAAATCAGAGCCTGATTATTATCTTGATCAAGTTTTGCCTATACTTTTGAGACGACAGGTTGTTCAATTGACAAAATTTGACTACAGACTTGCAAATAACCTTGATGATGAGCTACAAAAACTACGTTGCCGCGTTAATTTTCATGCTTTGAGATTTACAAAACCTATACAAGAACTTGGTCAAAGAATTGTTATGAGAATGCAAAAGATGGCACCGCGTTTCATAGCAGTCCATTTGAGGTTTGAACCAGATATGCTAGCATTTTCAGGTTGTTATTTTGGTGGGGGAGAAAAAGAGAGACGTGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTACCTGATTTGAGCCCAGATGGAGAACGGAAGCGAGGGAAATGTCCTCTTAGTCCTCATGAAGTGGGTTTGATGCTGCGGGCACTTGGCTTTTCAAATGACACATACCTCTATGTTGCGTCAGGAGAAGTATATGGAGGGGAAGAAACTATGCAGCCTCTCAGAGATCTTTTTCCCAACATCTATACAAAGGAGATGCTAGCTGAGGAAGAGCTGAAACCTTTCCTTCCATTCTCTTCCCGCCTTGCTGCTATTGACTACATTGTTTGTGATGAAAGTGATGTATTTGTTACTAACAACAATGGTAACATGGCAAAGATTCTCGCAGGTCGAAGGAGATATATGGGTCACAAAAGAACAATCAGACCAAATGCAAAGAAGCTTAGCACGCTATTGGCGGGAAGGCATCAAATGGACTGGGATACCTTTGCCAAAAAGGTTAAGTCATGCCAGAGAGGATTCATGGGAGAGCCAGATGAGATGAGACCTGGACGAGGTGAATTTCATGAATTTCCAAGCTCTTGCGTGTGCAGGAGACCATATGTGGATGAAGAACTCAGCAAAGAGGTATACCGTTCCCCTAAACTCGTTGCAATTAACCTTACTGCAAAAGCTTATTCCTCGTCGAATGGAATTAGAAGAGGCAGGACATGA
Predicted protein sequences of Glyma11g03641
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g03641.1 sequence type=predicted peptide gene model=Glyma11g03641 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGVGVGLEKLSLLSTTNLAVLAQANNKCSSSRKHVCWRSSTTTTTPFQQQRKPISWSVMCGFMLFGLGLISLLTGHMASDLEWYSHRRSLYSTMDGSYRAPIDVWKSQYSKYYYGCAERGRGYAPAVPERMSNGYLLIGTSGGLNQQRTGITDAVVVARILNATLVVPELDHHSYWKDDSDFIHIFDVDWFISYLAKDVTIVKRVPDKFMRSMEKPPYTMRVPRKSEPDYYLDQVLPILLRRQVVQLTKFDYRLANNLDDELQKLRCRVNFHALRFTKPIQELGQRIVMRMQKMAPRFIAVHLRFEPDMLAFSGCYFGGGEKERRELGEIRKRWTTLPDLSPDGERKRGKCPLSPHEVGLMLRALGFSNDTYLYVASGEVYGGEETMQPLRDLFPNIYTKEMLAEEELKPFLPFSSRLAAIDYIVCDESDVFVTNNNGNMAKILAGRRRYMGHKRTIRPNAKKLSTLLAGRHQMDWDTFAKKVKSCQRGFMGEPDEMRPGRGEFHEFPSSCVCRRPYVDEELSKEVYRSPKLVAINLTAKAYSSSNGIRRGRT*
>Glyma11g03641.2 sequence type=predicted peptide gene model=Glyma11g03641 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGVGVGLEKLSLLSTTNLAVLAQANNKCSSSRKHVCWRSSTTTTTPFQQQRKPISWSVMCGFMLFGLGLISLLTGHMASDLEWYSHRRSLYSTMDGSYRAPIDVWKSQYSKYYYGCAERGRGYAPAVPERMSNGYLLIGTSGGLNQQRTGITDAVVVARILNATLVVPELDHHSYWKDDSDFIHIFDVDWFISYLAKDVTIVKRVPDKFMRSMEKPPYTMRVPRKSEPDYYLDQVLPILLRRQVVQLTKFDYRLANNLDDELQKLRCRVNFHALRFTKPIQELGQRIVMRMQKMAPRFIAVHLRFEPDMLAFSGCYFGGGEKERRELGEIRKRWTTLPDLSPDGERKRGKCPLSPHEVGLMLRALGFSNDTYLYVASGEVYGGEETMQPLRDLFPNIYTKEMLAEEELKPFLPFSSRLAAIDYIVCDESDVFVTNNNGNMAKILAGRRRYMGHKRTIRPNAKKLSTLLAGRHQMDWDTFAKKVKSCQRGFMGEPDEMRPGRGEFHEFPSSCVCRRPYVDEELSKEVYRSPKLVAINLTAKAYSSSNGIRRGRT*