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Report for Sequence Feature Glyma11g03120
Feature Type: gene_model
Chromosome: Gm11
Start: 2052193
stop: 2061856
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma11g03120
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G12430 AT
Annotation by Michelle Graham. TAIR10: armadillo repeat kinesin 3 | chr1:4234122-4238552 REVERSE LENGTH=919
SoyBase E_val: 0 ISS
GO:0007018 GO-bp
Annotation by Michelle Graham. GO Biological Process: microtubule-based movement
SoyBase N/A ISS
GO:0009855 GO-bp
Annotation by Michelle Graham. GO Biological Process: determination of bilateral symmetry
SoyBase N/A ISS
GO:0009887 GO-bp
Annotation by Michelle Graham. GO Biological Process: organ morphogenesis
SoyBase N/A ISS
GO:0010051 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylem and phloem pattern formation
SoyBase N/A ISS
GO:0048439 GO-bp
Annotation by Michelle Graham. GO Biological Process: flower morphogenesis
SoyBase N/A ISS
GO:0048519 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of biological process
SoyBase N/A ISS
GO:0009574 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: preprophase band
SoyBase N/A ISS
GO:0003777 GO-mf
Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
KOG0240
KOG
Kinesin (SMY1 subfamily)
JGI ISS
PTHR24115 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24115:SF69 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00225 PFAM
Kinesin motor domain
JGI ISS
PF00514 PFAM
Armadillo/beta-catenin-like repeat
JGI ISS
UniRef100_G7KEW4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kinesin-1 n=1 Tax=Medicago truncatula RepID=G7KEW4_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002337AF2 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002337AF2 related cluster n=1 Tax=unknown RepID=UPI0002337AF2
SoyBase E_val: 0 ISS
Expression Patterns of Glyma11g03120
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma11g03120
Paralog Evidence Comments
Glyma01g42240 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma11g03120 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.11g028700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma11g03120
Coding sequences of Glyma11g03120
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma11g03120.1 sequence type=CDS gene model=Glyma11g03120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCCACCTCTCAGGGTGGTAACAGTTACAGAAATGCCAGAACCTCTCTCAAACCACACGTCAAGTCAAAGCCTTCCCAACAACGCCGTAATAGCACCGGCTCCGTCAACGGCAAGGAACACGCTGCTGCTGTTCCCGGAAGAGTTAGAGTGGCTGTTAGATTGCGGCCACGGAATGCAGAGGAATCGGTGGCGGATGCTGACTTTGCTGACTGTGTTGAATTGCAGCCAGAGCTCAAGAGGTTGAAACTTCGGAAAAACAATTGGGATGCGGATACTTATGAATTTGATGAGGTGCTCACTGAATTTTCATCACAAAAACGCGTTTATGAAGTTGTGGCAAGGCCTGTTGTGGAGAGTGTACTGGATGGCTACAATGGGACAATTATGGCGTATGGGCAGACTGGTACTGGTAAGACTTATACTCTTGGACGACTTGGAGAGGAAGACAATGCTGCACGTGGAATAATGGTGCGGGCCATGGAGGATATTCTTGCAGATGTTTCTTTGGACACTGATTCAGTCTCAGTCTCTTATTTGCAGCTTTATATGGAGACTATACAAGATCTGCTTGACCCTGCCAATGATAACATAACCATCGTAGAAGATCCCAAAACTGGTGATGTTTCATTACCTGGAGCTAGCCTAGTTGACATTAGGGACAAGCAGAGTTTTGTAGAACTATTAAGATTAGGAGAGGCTCACCGCTTTGCTGCAAATACAAAACTGAATACAGAATCTTCTCGAAGTCATGCTATTCTGATGGTGCATGTAAAGAGATCCGTGAAAGGAAGAGATGCGGCTCTTTCAAGTGAAAATGGCAATCATTCACACGTGGTTAAATCAATAAAGCCGCCTCTTGTTCGGAAAGGCAAGTTGGTTGTTGTAGATCTTGCTGGTTCAGAGCGAATTGACAAGTCAGGAAGTGAAGGACATACATTAGAGGAAGCCAAATCTATCAATCTATCCTTGAGTGCATTGGGGAAGTGTATTAATGCACTTGCAGAGAATAGTGCACATGTGCCATTTCGTGACTCAAAGCTTACTAGATTGTTACGTGATTCATTTGGAGGTACAGCAAGAACTTCACTAGTCATTACTATTGGGCCATCTCCACGGCATAGGGGAGAGACTGCCAGTACTATAATGTTTGGGCAGAGGGCTATGAAGGTGGAAAACATGGTAAAGCTAAAGGAGGAATTTGATTACAAAAGCTTATCTAGGAGGTTAGATATAGAATTAGATAAACTCATTGTGGAACATGAAAGGCAACAGAAGACATTTGAGGATGAGATTGAAAGGTTAGCCACTGAAGCACAACATCGGATATCTGAGGCTGAAAGAAACTATGTAGATTCATTGGAGAAGGAGAGATCAAAATATCAGAAAGACTATATGGAGTCAATTAAGAAGCTTGAAGAGCAGTTTGTGATGAATCAACGAAAGAATGAGGAATCTCATATGAAATCGAGTGGAGAGATTCCCAGAGTGTCTGCTGAGGAACTGGCTGATTTGAAAAAAATGCTTCAGAAAGAGACTCATCTAAGAAAAGCTGCTGAAGGGGAAGTAAACAATCTGAAGAATCAAGTGGCTGAACTAAAAAAGTCAGAGGCATCAGGAAAATCAGAGATCTTAAAACTTCATAACATGTTGGAAGATAAGGAAGGTCAAAAAGAGAAACTTGAAGGAGAAATAGCAATATTACAAAGTCAATTGTTGCAGTTAAATCTTCAAGCTGATGAGACAAGACGACAACTTGACAGAGATGGGCTTGAAAAAGAAATGGGTGGTCTTAATTCTCTCACTTCTCAAGTTAAACATCAACAGCAAGCTTCAGGAAATGGAGAGAAACCCTCAATAGCCAAGCTCTTTGAGCAAGTGGGATTGCAGAAAATTTTGTCTTTGCTTGAAGCAGAAGATGCTGATGTGCGAATCCATGCTGTGAAAGTTGTAGCAAATCTAGCTGCTGAAGAAACAAATCAAGGGAAAATTGTGGAAGCAGGAGGGCTCACATCCTTGCTTAACCTGCTTAAGAGCTCCCATGATGAGACCATACATAGAGTTGCTGCAGGTGCAATTGCAAATTTGGCAATGAATGAAACCAACCAAGAACTCATTATGGCCCAAGGGGGCATTAGCTTGCTGTCAATGACTGCAGCCAATGCTGAAGATCCTCAAACCCTTCGAATGGTTGCTGGAGCCATTGCTAATCTTTGCGGCAATGATAAACTACAAACAAAACTAAGGTCCGAAGGTGGTATCAAGGCACTGCTGGGAATGGTCAGATGCAGACATCCTGATGTACATGCACAAGTTGCTCGTGGAATAGCAAATTTTGCGAAGTGCGAGTCAAGAGCATCTAGTCAAGGGACAAAGAGTGGAAGATCTTTCCTTATTGAGGATGGTGCCCTTCCATGGATTGTTCAAAATGCAAACAACGAAGCTGCATCAGTTAGGCGTCATATTGAGCTTGCACTCTGTCACTTAGCACAACATGAAATAAATGCAAGAGACATGATTAGTGGGGGTGCATTGTGGGAGCTAGTTCGTATCTCCCGAGATTGTTCAAGAGAAGATATAAAGACTCTTGCTCATCGAACACTAGTCTCCAGCCCCACTTTCCAAGCTGAAATGAGACGTTTGCGGGTAAATTACTGA
Predicted protein sequences of Glyma11g03120
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma11g03120.1 sequence type=predicted peptide gene model=Glyma11g03120 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MATSQGGNSYRNARTSLKPHVKSKPSQQRRNSTGSVNGKEHAAAVPGRVRVAVRLRPRNAEESVADADFADCVELQPELKRLKLRKNNWDADTYEFDEVLTEFSSQKRVYEVVARPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDNAARGIMVRAMEDILADVSLDTDSVSVSYLQLYMETIQDLLDPANDNITIVEDPKTGDVSLPGASLVDIRDKQSFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSVKGRDAALSSENGNHSHVVKSIKPPLVRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPFRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETASTIMFGQRAMKVENMVKLKEEFDYKSLSRRLDIELDKLIVEHERQQKTFEDEIERLATEAQHRISEAERNYVDSLEKERSKYQKDYMESIKKLEEQFVMNQRKNEESHMKSSGEIPRVSAEELADLKKMLQKETHLRKAAEGEVNNLKNQVAELKKSEASGKSEILKLHNMLEDKEGQKEKLEGEIAILQSQLLQLNLQADETRRQLDRDGLEKEMGGLNSLTSQVKHQQQASGNGEKPSIAKLFEQVGLQKILSLLEAEDADVRIHAVKVVANLAAEETNQGKIVEAGGLTSLLNLLKSSHDETIHRVAAGAIANLAMNETNQELIMAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQTKLRSEGGIKALLGMVRCRHPDVHAQVARGIANFAKCESRASSQGTKSGRSFLIEDGALPWIVQNANNEAASVRRHIELALCHLAQHEINARDMISGGALWELVRISRDCSREDIKTLAHRTLVSSPTFQAEMRRLRVNY*