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A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G21070 | AT | Annotation by Michelle Graham. TAIR10: Nucleotide-sugar transporter family protein | chr1:7376148-7377810 REVERSE LENGTH=348 | SoyBase | E_val: 0 | ISS |
GO:0006863 | GO-bp | Annotation by Michelle Graham. GO Biological Process: purine nucleobase transport | SoyBase | N/A | ISS |
GO:0005794 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
KOG1441 | KOG | Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter | JGI | ISS | |
PTHR11132 | Panther | SOLUTE CARRIER FAMILY 35 | JGI | ISS | |
PF03151 | PFAM | Triose-phosphate Transporter family | JGI | ISS | |
UniRef100_B9R8X1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Organic anion transporter, putative n=1 Tax=Ricinus communis RepID=B9R8X1_RICCO | SoyBase | E_val: 0 | ISS |
UniRef100_I1LFM6 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LFM6_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma11g00210 not represented in the dataset |
Glyma11g00210 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.11g000200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma11g00210.2 sequence type=transcript gene model=Glyma11g00210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CTTGCATGTGCTTACATGTTAGTACATGTTTAAAAAAAATGAAAATTGGAGTTTAAAAAGGAAAATATTTACTTAATTTTCAAATTTAGTTAGGACGTATTAGGAGACAATCATGTGAAGGACGAGGCAAGAAGGAAGTGTTGTGGGAGGAAAGAGGCAGAGCTGCAATCACCAGAGTGGAAGCGCGAAACGGTCCTCCCCGGCTTTCCATTTTTTCTCTTCTGATGAAATTTTAGTTCATCCCAGTTGCTGATTGAGATTGAATTTAAATTCGAAAAAGCGTACTTGTGCCACTGTACTTTTACAGATCTGCGGCTACGGGCTAGCCTATCGTATTTTTGCGTAGATCTAGTGTCCGTGAAGCGGTTACCATTTCACCACTCACCACTATTCATCTCTTTCTTCTATATTGATCTGAAATTGAAGATGGAAAGCGAAAAGAAATCGTCAGCAATATCTGATGTGGGAGCATGGGCCATGAACGTTGTCAGCTCCGTCGGAATTATTATGGCCAACAAACAGCTTATGTCCAACAATGGCTATGCTTTCAGCTTTGCCAGTTCGTTAACTGGGTTCCACTTTGCCGTAACTGCTCTCGTTGGTCTGGTGTCAAATGCTACCGGTTACTCAGCGTCAAAGCATGTTCCTATGTGGGAGCTTATTTGGTTCTCACTGGTTGCCAATATGTCTATCACGGGGATGAACTTTAGCCTCATGCTCAACTCCGTTGGATTCTACCAAATATCAAAACTGAGCATGATTCCTGTGGTTTGTGTGATGGAATGGATACTTCACAACAAACACTACTCAAGGGAAGTGAAAATGTCAGTGGTGGTTGTGGTTATTGGTGTCGGTGTTTGCACTGTAACTGATGTAAAAGTTAACCTCAAAGGTTTCATGTGTGCCTGTATAGCAGTTTTGTCAACATCTTTACAGCAAATTTCAATAGGTTCTCTTCAAAAGAAATATTCAATTGGATCTTTTGAATTGCTGAGTAAAACTGCTCCCATCCAAGCGCTTTTTCTTCTTATTCTTGGTCCATTTGTTGATTACTACCTCAGTGGCAAATTGATAACCAACTATAAGATGTCTTCTGGTGCCATTTTATTCATTCTTCTTTCATGCTCGCTAGCTGTATTTTGCAATGTGAGCCAATACCTTTGCATTGGGCGCTTTTCAGCTGTTTCCTTCCAGGTTTTAGGCCACATGAAAACATTGGGCTGTAGAGCTTGAAAAGCAGTCAAATGCAAAGACCTTACCTCACGCGAAAAACAGCATGACGGAAGAAGAAATTAGATTATTGAGGGATGGAGTAGAAAAGAGTCCCCTGAAGGATGTTGAACTTGGTGAGGCCCAAGGATAGATTGACTCAGATTTGGTGGTGAAATTGATGAGAAATGATGCAGGCAATTATATTGTGTATTGCTTTATAATTTGGTTTGTTCTTTTGTCTAGTTTACCTAGTAGTAAAACTTGGTTTCTATTTGCTCACACTGGCACGGATCCAGTTTTAGAAATTGTGTTCCCGTTCATCAGCAATGTTTCTTTGTTAGTTTTATTTCATTTGTTGTTATGTTGAGGTTATTTATTTGGCCTGCCAGGAAATTGCTAGATGAACAATATGATGGCGCCATTAAGATGTATAATGTGCACGCTAATGATACGCGATATCAATTCCCTCTTCAAACTTCTTTTCGTGTCTTCTTCTTTTAATGTGAAAAAATATTTTATTGTGCTCTTCTTATGATA
>Glyma11g00210.1 sequence type=CDS gene model=Glyma11g00210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAAAGCGAAAAGAAATCGTCAGCAATATCTGATGTGGGAGCATGGGCCATGAACGTTGTCAGCTCCGTCGGAATTATTATGGCCAACAAACAGCTTATGTCCAACAATGGCTATGCTTTCAGCTTTGCCAGTTCGTTAACTGGGTTCCACTTTGCCGTAACTGCTCTCGTTGGTCTGGTGTCAAATGCTACCGGTTACTCAGCGTCAAAGCATGTTCCTATGTGGGAGCTTATTTGGTTCTCACTGGTTGCCAATATGTCTATCACGGGGATGAACTTTAGCCTCATGCTCAACTCCGTTGGATTCTACCAAATATCAAAACTGAGCATGATTCCTGTGGTTTGTGTGATGGAATGGATACTTCACAACAAACACTACTCAAGGGAAGTGAAAATGTCAGTGGTGGTTGTGGTTATTGGTGTCGGTGTTTGCACTGTAACTGATGTAAAAGTTAACCTCAAAGGTTTCATGTGTGCCTGTATAGCAGTTTTGTCAACATCTTTACAGCAAATTTCAATAGGTTCTCTTCAAAAGAAATATTCAATTGGATCTTTTGAATTGCTGAGTAAAACTGCTCCCATCCAAGCGCTTTTTCTTCTTATTCTTGGTCCATTTGTTGATTACTACCTCAGTGGCAAATTGATAACCAACTATAAGATGTCTTCTGGTGCCATTTTATTCATTCTTCTTTCATGCTCGCTAGCTGTATTTTGCAATGTGAGCCAATACCTTTGCATTGGGCGCTTTTCAGCTGTTTCCTTCCAGGTTTTAGGCCACATGAAAACAGTATGTGTTCTGACTCTGGGATGGCTGCTATTTGATTCGGAGCTAACTTTCAAAAATATCATGGGAATGGTCATCGCAGTTGTTGGCATGGTAATTTACAGTTGGGCTGTAGAGCTTGAAAAGCAGTCAAATGCAAAGACCTTACCTCACGCGAAAAACAGCATGACGGAAGAAGAAATTAGATTATTGAGGGATGGAGTAGAAAAGAGTCCCCTGAAGGATGTTGAACTTGGTGAGGCCCAAGGATAG >Glyma11g00210.2 sequence type=CDS gene model=Glyma11g00210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGAAAGCGAAAAGAAATCGTCAGCAATATCTGATGTGGGAGCATGGGCCATGAACGTTGTCAGCTCCGTCGGAATTATTATGGCCAACAAACAGCTTATGTCCAACAATGGCTATGCTTTCAGCTTTGCCAGTTCGTTAACTGGGTTCCACTTTGCCGTAACTGCTCTCGTTGGTCTGGTGTCAAATGCTACCGGTTACTCAGCGTCAAAGCATGTTCCTATGTGGGAGCTTATTTGGTTCTCACTGGTTGCCAATATGTCTATCACGGGGATGAACTTTAGCCTCATGCTCAACTCCGTTGGATTCTACCAAATATCAAAACTGAGCATGATTCCTGTGGTTTGTGTGATGGAATGGATACTTCACAACAAACACTACTCAAGGGAAGTGAAAATGTCAGTGGTGGTTGTGGTTATTGGTGTCGGTGTTTGCACTGTAACTGATGTAAAAGTTAACCTCAAAGGTTTCATGTGTGCCTGTATAGCAGTTTTGTCAACATCTTTACAGCAAATTTCAATAGGTTCTCTTCAAAAGAAATATTCAATTGGATCTTTTGAATTGCTGAGTAAAACTGCTCCCATCCAAGCGCTTTTTCTTCTTATTCTTGGTCCATTTGTTGATTACTACCTCAGTGGCAAATTGATAACCAACTATAAGATGTCTTCTGGTGCCATTTTATTCATTCTTCTTTCATGCTCGCTAGCTGTATTTTGCAATGTGAGCCAATACCTTTGCATTGGGCGCTTTTCAGCTGTTTCCTTCCAGGTTTTAGGCCACATGAAAACATTGGGCTGTAGAGCTTGA
>Glyma11g00210.1 sequence type=predicted peptide gene model=Glyma11g00210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MESEKKSSAISDVGAWAMNVVSSVGIIMANKQLMSNNGYAFSFASSLTGFHFAVTALVGLVSNATGYSASKHVPMWELIWFSLVANMSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSREVKMSVVVVVIGVGVCTVTDVKVNLKGFMCACIAVLSTSLQQISIGSLQKKYSIGSFELLSKTAPIQALFLLILGPFVDYYLSGKLITNYKMSSGAILFILLSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVIAVVGMVIYSWAVELEKQSNAKTLPHAKNSMTEEEIRLLRDGVEKSPLKDVELGEAQG* >Glyma11g00210.2 sequence type=predicted peptide gene model=Glyma11g00210 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MESEKKSSAISDVGAWAMNVVSSVGIIMANKQLMSNNGYAFSFASSLTGFHFAVTALVGLVSNATGYSASKHVPMWELIWFSLVANMSITGMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHNKHYSREVKMSVVVVVIGVGVCTVTDVKVNLKGFMCACIAVLSTSLQQISIGSLQKKYSIGSFELLSKTAPIQALFLLILGPFVDYYLSGKLITNYKMSSGAILFILLSCSLAVFCNVSQYLCIGRFSAVSFQVLGHMKTLGCRA*
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